Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | PJ19_RS05890 | Genome accession | NZ_CP010072 |
| Coordinates | 1089853..1090155 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain 01-1512 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1084853..1095155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PJ19_RS05865 (PJ19_05865) | rpsR | 1085215..1085475 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| PJ19_RS05870 (PJ19_05870) | lon | 1085536..1087911 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| PJ19_RS05875 (PJ19_05875) | - | 1087928..1088575 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| PJ19_RS05880 (PJ19_05880) | fliW | 1088736..1089125 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| PJ19_RS05885 (PJ19_05885) | proC | 1089125..1089856 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| PJ19_RS05890 (PJ19_05890) | ctsT | 1089853..1090155 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| PJ19_RS05895 (PJ19_05895) | - | 1090152..1090814 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| PJ19_RS05900 (PJ19_05900) | - | 1090811..1091263 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| PJ19_RS05905 (PJ19_05905) | hemD | 1091260..1091889 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| PJ19_RS05910 (PJ19_05910) | thiE | 1091867..1092499 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| PJ19_RS05915 (PJ19_05915) | thiD | 1092489..1093301 (-) | 813 | WP_002899485.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| PJ19_RS05920 (PJ19_05920) | - | 1093298..1093984 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| PJ19_RS05925 (PJ19_05925) | - | 1093981..1094742 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=134001 PJ19_RS05890 WP_002853046.1 1089853..1090155(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 01-1512]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=134001 PJ19_RS05890 WP_002853046.1 1089853..1090155(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 01-1512]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |