Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   PJ19_RS03955 Genome accession   NZ_CP010072
Coordinates   716588..717025 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni subsp. jejuni strain 01-1512     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 711588..722025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ19_RS03930 (PJ19_03930) - 712336..713187 (+) 852 WP_168848224.1 hypothetical protein -
  PJ19_RS03935 (PJ19_03935) - 713322..713900 (+) 579 WP_250494993.1 DUF4118 domain-containing protein -
  PJ19_RS03940 (PJ19_03940) uvrB 714002..715975 (-) 1974 WP_043012826.1 excinuclease ABC subunit UvrB -
  PJ19_RS03945 (PJ19_03945) - 716129..716359 (+) 231 WP_002852327.1 hypothetical protein -
  PJ19_RS03950 (PJ19_03950) - 716349..716591 (+) 243 WP_002854947.1 hypothetical protein -
  PJ19_RS03955 (PJ19_03955) Cj0683 716588..717025 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  PJ19_RS03960 (PJ19_03960) priA 717007..718860 (+) 1854 WP_002860009.1 primosomal protein N' -
  PJ19_RS03965 (PJ19_03965) cipA 718870..720264 (-) 1395 WP_002888181.1 DUF2972 domain-containing protein -
  PJ19_RS03970 (PJ19_03970) ispG 720412..721485 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=133998 PJ19_RS03955 WP_002852324.1 716588..717025(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 01-1512]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=133998 PJ19_RS03955 WP_002852324.1 716588..717025(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 01-1512]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment