Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   QZ67_RS07455 Genome accession   NZ_CP010058
Coordinates   1420838..1422022 (-) Length   394 a.a.
NCBI ID   WP_039333253.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain YH001     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1415838..1427022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZ67_RS07430 (QZ67_01543) fliL 1416986..1417522 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  QZ67_RS07435 (QZ67_01544) acpS 1417522..1417869 (+) 348 WP_002825806.1 holo-ACP synthase -
  QZ67_RS07440 (QZ67_01545) - 1417870..1418289 (-) 420 WP_002855518.1 hypothetical protein -
  QZ67_RS07445 (QZ67_01546) - 1418286..1419647 (-) 1362 WP_002855307.1 cytochrome P450 -
  QZ67_RS07450 (QZ67_01547) - 1419644..1420765 (-) 1122 WP_002894818.1 hypothetical protein -
  QZ67_RS07455 (QZ67_01548) kpsS 1420838..1422022 (-) 1185 WP_039333253.1 capsule polysaccharide modification protein KpsS Regulator
  QZ67_RS07460 (QZ67_01549) kpsC 1422019..1424088 (-) 2070 WP_002894815.1 capsular polysaccharide biosynthesis protein -
  QZ67_RS07465 (QZ67_01550) cysC 1424085..1424597 (-) 513 WP_002894813.1 cytidine diphosphoramidate kinase -
  QZ67_RS07470 (QZ67_01551) - 1424587..1425348 (-) 762 WP_002872736.1 CTP:phosphoglutamine cytidylyltransferase -
  QZ67_RS07475 (QZ67_01552) - 1425350..1425952 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46847.50 Da        Isoelectric Point: 9.9073

>NTDB_id=133946 QZ67_RS07455 WP_039333253.1 1420838..1422022(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain YH001]
MRFSTKIKKEFSGKNILLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
IAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=133946 QZ67_RS07455 WP_039333253.1 1420838..1422022(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain YH001]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATATTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATAGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.731

100

0.987


Multiple sequence alignment