Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QZ67_RS05555 | Genome accession | NZ_CP010058 |
| Coordinates | 1048283..1048585 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain YH001 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1043283..1053585
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QZ67_RS05530 (QZ67_01146) | rpsR | 1043645..1043905 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| QZ67_RS05535 (QZ67_01147) | lon | 1043966..1046341 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| QZ67_RS05540 (QZ67_01148) | - | 1046358..1047005 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| QZ67_RS05545 (QZ67_01149) | fliW | 1047166..1047555 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QZ67_RS05550 (QZ67_01150) | proC | 1047555..1048286 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QZ67_RS05555 (QZ67_01151) | ctsT | 1048283..1048585 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| QZ67_RS05560 (QZ67_01152) | - | 1048582..1049244 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| QZ67_RS05565 (QZ67_01153) | - | 1049241..1049693 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| QZ67_RS05570 (QZ67_01154) | hemD | 1049690..1050319 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| QZ67_RS05575 (QZ67_01155) | thiE | 1050297..1050929 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| QZ67_RS05580 (QZ67_01156) | thiD | 1050919..1051731 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QZ67_RS05585 (QZ67_01157) | - | 1051728..1052414 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| QZ67_RS05590 (QZ67_01158) | - | 1052411..1053172 (-) | 762 | WP_002894311.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=133937 QZ67_RS05555 WP_002853046.1 1048283..1048585(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain YH001]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=133937 QZ67_RS05555 WP_002853046.1 1048283..1048585(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain YH001]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |