Detailed information NTG0133912

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QX56_RS19345
• Genome accession: NZ_CP010053
• Coordinates: 3845767..3846912 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PS832
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3840767..3851912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QX56_RS19320 (QX56_20225)	albF	3840783..3842063 (+)	1281	WP_003242974.1	pitrilysin family protein	-
QX56_RS19325 (QX56_20230)	albG	3842060..3842761 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QX56_RS19330 (QX56_20235)	ywhL	3842767..3844143 (-)	1377	WP_003244415.1	YncE family protein	-
QX56_RS19335 (QX56_20240)	ywhK	3844182..3845537 (-)	1356	WP_003227552.1	YncE family protein	-
QX56_RS22930 (QX56_20245)	-	3845534..3845764 (-)	231	WP_009968328.1	hypothetical protein	-
QX56_RS19345 (QX56_20250)	rapF	3845767..3846912 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
QX56_RS19350 (QX56_20255)	phrF	3846896..3847015 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QX56_RS19355 (QX56_20260)	ywhH	3847114..3847587 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
QX56_RS19360 (QX56_20265)	speB	3847619..3848491 (-)	873	WP_003227545.1	agmatinase	-
QX56_RS19365 (QX56_20270)	speE	3848552..3849382 (-)	831	WP_003227543.1	spermidine synthase	-
QX56_RS19370 (QX56_20275)	pbpG	3849584..3851659 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=133912 QX56_RS19345 WP_003227549.1 3845767..3846912(+) (rapF) [Bacillus subtilis strain PS832]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=133912 QX56_RS19345 WP_003227549.1 3845767..3846912(+) (rapF) [Bacillus subtilis strain PS832]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572