Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   QX56_RS16450 Genome accession   NZ_CP010053
Coordinates   3256858..3256998 (-) Length   46 a.a.
NCBI ID   WP_003220708.1    Uniprot ID   G4P060
Organism   Bacillus subtilis strain PS832     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3251858..3261998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QX56_RS16425 (QX56_17240) yuxO 3252171..3252551 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  QX56_RS16430 (QX56_17245) comA 3252570..3253214 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QX56_RS16435 (QX56_17250) comP 3253295..3255604 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  QX56_RS16440 (QX56_17255) comX 3255619..3255786 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  QX56_RS16445 (QX56_17260) comQ 3255774..3256673 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  QX56_RS16450 (QX56_17265) degQ 3256858..3256998 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QX56_RS22570 - 3257220..3257345 (+) 126 WP_003228793.1 hypothetical protein -
  QX56_RS16455 (QX56_17270) - 3257459..3257827 (+) 369 WP_003243784.1 hypothetical protein -
  QX56_RS16460 (QX56_17275) pdeH 3257803..3259032 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  QX56_RS16465 (QX56_17280) pncB 3259169..3260641 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  QX56_RS16470 (QX56_17285) pncA 3260657..3261208 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -
  QX56_RS16475 (QX56_17290) yueI 3261305..3261703 (-) 399 WP_003242987.1 YueI family protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5546.44 Da        Isoelectric Point: 6.2559

>NTDB_id=133902 QX56_RS16450 WP_003220708.1 3256858..3256998(-) (degQ) [Bacillus subtilis strain PS832]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=133902 QX56_RS16450 WP_003220708.1 3256858..3256998(-) (degQ) [Bacillus subtilis strain PS832]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4P060

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment