Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | QX56_RS01950 | Genome accession | NZ_CP010053 |
| Coordinates | 372164..372613 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain PS832 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 367164..377613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QX56_RS01920 (QX56_01970) | yckA | 367315..367995 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| QX56_RS01925 (QX56_01975) | yckB | 368005..368868 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| QX56_RS22310 | - | 369030..369227 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| QX56_RS01930 (QX56_01985) | yckC | 369246..369701 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| QX56_RS01935 (QX56_01990) | yckD | 369783..370115 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| QX56_RS01940 (QX56_01995) | bglC | 370269..371702 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| QX56_RS01945 (QX56_02000) | nin/comJ | 371739..372137 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| QX56_RS01950 (QX56_02005) | nucA/comI | 372164..372613 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| QX56_RS01955 (QX56_02010) | tlpC | 372781..374502 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| QX56_RS01960 (QX56_02015) | hxlB | 374613..375170 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| QX56_RS01965 (QX56_02020) | hxlA | 375176..375808 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| QX56_RS01970 (QX56_02025) | hxlR | 376041..376403 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=133839 QX56_RS01950 WP_003246436.1 372164..372613(-) (nucA/comI) [Bacillus subtilis strain PS832]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=133839 QX56_RS01950 WP_003246436.1 372164..372613(-) (nucA/comI) [Bacillus subtilis strain PS832]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |