Detailed information NTG0133826

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QU35_RS19370
• Genome accession: NZ_CP010052
• Coordinates: 3846014..3847159 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3841014..3852159

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QU35_RS19345 (QU35_20235)	albF	3841030..3842310 (+)	1281	WP_003242974.1	pitrilysin family protein	-
QU35_RS19350 (QU35_20240)	albG	3842307..3843008 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QU35_RS19355 (QU35_20245)	ywhL	3843014..3844390 (-)	1377	WP_003244415.1	YncE family protein	-
QU35_RS19360 (QU35_20250)	ywhK	3844429..3845784 (-)	1356	WP_003227552.1	YncE family protein	-
QU35_RS22905 (QU35_20255)	-	3845781..3846011 (-)	231	WP_009968328.1	hypothetical protein	-
QU35_RS19370 (QU35_20260)	rapF	3846014..3847159 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
QU35_RS19375 (QU35_20265)	phrF	3847143..3847262 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QU35_RS19380 (QU35_20270)	ywhH	3847361..3847834 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
QU35_RS19385 (QU35_20275)	speB	3847866..3848738 (-)	873	WP_003227545.1	agmatinase	-
QU35_RS19390 (QU35_20280)	speE	3848799..3849629 (-)	831	WP_003227543.1	spermidine synthase	-
QU35_RS19395 (QU35_20285)	pbpG	3849831..3851906 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=133826 QU35_RS19370 WP_003227549.1 3846014..3847159(+) (rapF) [Bacillus subtilis subsp. subtilis str. 168]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=133826 QU35_RS19370 WP_003227549.1 3846014..3847159(+) (rapF) [Bacillus subtilis subsp. subtilis str. 168]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572