Detailed information
Bioinformatically predicted
Overview
| Name | prx | Type | Regulator |
| Locus tag | AMD29_RS00880 | Genome accession | NZ_CP012419 |
| Coordinates | 121913..122095 (+) | Length | 60 a.a. |
| NCBI ID | WP_017647839.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain SG-M1 | ||
| Function | Inhibit ComR activation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 116913..127095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD29_RS00850 (AMD29_00850) | - | 118215..118607 (+) | 393 | WP_000889196.1 | DUF1366 domain-containing protein | - |
| AMD29_RS11795 | - | 118630..118758 (+) | 129 | WP_017647842.1 | hypothetical protein | - |
| AMD29_RS00855 (AMD29_00855) | - | 118767..119069 (+) | 303 | WP_017647841.1 | hypothetical protein | - |
| AMD29_RS00860 (AMD29_00860) | - | 119062..119289 (+) | 228 | WP_000609111.1 | phage holin | - |
| AMD29_RS00865 (AMD29_00865) | - | 119415..120749 (+) | 1335 | WP_017647840.1 | GH25 family lysozyme | - |
| AMD29_RS00870 (AMD29_00870) | - | 120893..121144 (-) | 252 | WP_000455662.1 | hypothetical protein | - |
| AMD29_RS11585 | - | 121285..121431 (-) | 147 | WP_001030869.1 | hypothetical protein | - |
| AMD29_RS00875 (AMD29_00875) | - | 121581..121790 (+) | 210 | WP_000424774.1 | helix-turn-helix domain-containing protein | - |
| AMD29_RS00880 (AMD29_00880) | prx | 121913..122095 (+) | 183 | WP_017647839.1 | hypothetical protein | Regulator |
| AMD29_RS00885 (AMD29_00885) | - | 122308..123000 (+) | 693 | WP_000049272.1 | histidine phosphatase family protein | - |
| AMD29_RS00890 (AMD29_00890) | - | 122997..123749 (+) | 753 | WP_000739808.1 | M15 family metallopeptidase | - |
| AMD29_RS00895 (AMD29_00895) | - | 123746..124321 (+) | 576 | WP_001231504.1 | glycoside hydrolase family 73 protein | - |
| AMD29_RS00900 (AMD29_00900) | hrcA | 124464..125498 (+) | 1035 | WP_001873630.1 | heat-inducible transcriptional repressor HrcA | - |
| AMD29_RS00905 (AMD29_00905) | grpE | 125501..126073 (+) | 573 | WP_001865751.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 60 a.a. Molecular weight: 6933.00 Da Isoelectric Point: 4.2702
>NTDB_id=133605 AMD29_RS00880 WP_017647839.1 121913..122095(+) (prx) [Streptococcus agalactiae strain SG-M1]
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK
MLYIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK
Nucleotide
Download Length: 183 bp
>NTDB_id=133605 AMD29_RS00880 WP_017647839.1 121913..122095(+) (prx) [Streptococcus agalactiae strain SG-M1]
ATGTTGTATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA
ATGTTGTATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| prx | Streptococcus pyogenes MGAS315 |
73.333 |
100 |
0.733 |
| prx | Streptococcus pyogenes MGAS8232 |
70 |
100 |
0.7 |
| prx | Streptococcus pyogenes MGAS315 |
68.333 |
100 |
0.683 |
| prx | Streptococcus pyogenes MGAS315 |
65 |
100 |
0.65 |
| prx | Streptococcus pyogenes MGAS315 |
90.244 |
68.333 |
0.617 |
| prx | Streptococcus pyogenes MGAS315 |
80.488 |
68.333 |
0.55 |
| prx | Streptococcus pyogenes MGAS315 |
73.171 |
68.333 |
0.5 |