Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WUE2121_RS10505 Genome accession   NZ_CP012394
Coordinates   2029961..2030929 (+) Length   322 a.a.
NCBI ID   WP_002239353.1    Uniprot ID   -
Organism   Neisseria meningitidis strain WUE2121     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2024961..2035929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WUE2121_RS14010 (WUE2121_1986) - 2025163..2025309 (-) 147 WP_002240086.1 hypothetical protein -
  WUE2121_RS10495 (WUE2121_1987) fetA 2025974..2028133 (+) 2160 WP_002240073.1 TonB-dependent siderophore receptor FetA/FrpB -
  WUE2121_RS10500 (WUE2121_1988) - 2028832..2029797 (+) 966 WP_002240071.1 siderophore ABC transporter substrate-binding protein -
  WUE2121_RS14420 - 2029815..2029964 (+) 150 WP_162051164.1 hypothetical protein -
  WUE2121_RS10505 (WUE2121_1989) ceuB 2029961..2030929 (+) 969 WP_002239353.1 ABC transporter permease Machinery gene
  WUE2121_RS10510 (WUE2121_1990) - 2030919..2031893 (+) 975 WP_002256221.1 iron chelate uptake ABC transporter family permease subunit -
  WUE2121_RS10515 (WUE2121_1991) - 2031938..2032564 (+) 627 WP_002256222.1 hypothetical protein -
  WUE2121_RS10520 (WUE2121_1992) - 2032644..2033402 (+) 759 WP_002221671.1 ABC transporter ATP-binding protein -
  WUE2121_RS10525 (WUE2121_1993) - 2033718..2034914 (+) 1197 WP_002248170.1 YadA-like family protein -
  WUE2121_RS10530 (WUE2121_1994) - 2034980..2035318 (-) 339 WP_002218119.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34371.64 Da        Isoelectric Point: 10.0380

>NTDB_id=133596 WUE2121_RS10505 WP_002239353.1 2029961..2030929(+) (ceuB) [Neisseria meningitidis strain WUE2121]
MTAKPFSLNLTNLLLLAALFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFIGLVVPNIISRLIGDKLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAH
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=133596 WUE2121_RS10505 WP_002239353.1 2029961..2030929(+) (ceuB) [Neisseria meningitidis strain WUE2121]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACCAACCTCCTGCTGCTGGCGGCGTTGTTTGCCGTCAGCCTGTCGGTGGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTATCCGACAGCCAGCAAGTGATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGCTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTTTGATGCGCAACCGTTTTGTC
GAGCCTTCTATGGCGGGCGCGGGTCAAAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGTTAATCGGGATGTTGGTGTTTATGATGCTTATCCGCCGCCTGCCGC
CGACGGCGCAACTGATGGTGCCGCTGGTGGGGATTATTTTCGGCGGCGTGGTTGAGGCGGTGGCGACGTTTATCGCGTAT
GAAAACGAAATGCTGCAAATGCTCGGCGTGTGGCAGCAGGGCGATTTTTCGAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTATCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAGACGGTCA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGTTTGATTATTGTGGCTTTGATTACGTCGCTGGTTATC
GTTACGGTCGGCAATATTCCGTTTATCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATAGGCGACAAACTGCGCCA
AAGCCTGCCTGCGGTGGCTTTGTTGGGTGCGTCTTTGGTTTTATTGTGCGACATTATCGGACGCGTGATTGTGTTTCCGT
TTGAAATTCCGGTATCGACCGTCTTCGGCGTATTGGGTACGGCGTTGTTTTTATGGCTTTTGTTAAGGAAACCTGCTCAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.528

93.478

0.388

Multiple sequence alignment