Detailed information NTG0133595

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QF06_RS17135
• Genome accession: NZ_CP010014
• Coordinates: 3482344..3483489 (+)
• Length: 381 a.a.
• NCBI ID: WP_015250985.1
• Uniprot ID: -
• Organism: Bacillus sp. YP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3477344..3488489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QF06_RS17110 (QF06_17115)	-	3477360..3478640 (+)	1281	WP_003227558.1	pitrilysin family protein	-
QF06_RS17115 (QF06_17120)	albG	3478637..3479338 (+)	702	WP_043940223.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QF06_RS17120 (QF06_17125)	-	3479343..3480719 (-)	1377	WP_043940224.1	YncE family protein	-
QF06_RS17125 (QF06_17130)	-	3480759..3482114 (-)	1356	WP_043940225.1	YncE family protein	-
QF06_RS17135 (QF06_17140)	rapF	3482344..3483489 (+)	1146	WP_015250985.1	response regulator aspartate phosphatase RapF	Regulator
QF06_RS17140 (QF06_17145)	phrF	3483473..3483592 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QF06_RS17145 (QF06_17150)	-	3483845..3484324 (+)	480	WP_015714892.1	hypothetical protein	-
QF06_RS17150 (QF06_17155)	-	3484473..3485261 (+)	789	WP_015714893.1	membrane protein	-
QF06_RS17155 (QF06_17160)	-	3485248..3485922 (+)	675	WP_015714894.1	hypothetical protein	-
QF06_RS17160 (QF06_17165)	-	3485932..3486729 (+)	798	WP_231573542.1	hypothetical protein	-
QF06_RS17165 (QF06_17170)	-	3486732..3487379 (+)	648	WP_015714896.1	ABC transporter ATP-binding protein	-
QF06_RS17170 (QF06_17175)	-	3487372..3487932 (+)	561	WP_015714897.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45590.06 Da
• Isoelectric Point: 5.0624

>NTDB_id=133595 QF06_RS17135 WP_015250985.1 3482344..3483489(+) (rapF) [Bacillus sp. YP1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=133595 QF06_RS17135 WP_015250985.1 3482344..3483489(+) (rapF) [Bacillus sp. YP1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572