Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QF06_RS06145 Genome accession   NZ_CP010014
Coordinates   1233330..1233914 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus sp. YP1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1228330..1238914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QF06_RS06115 (QF06_06115) dapD 1228518..1229228 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QF06_RS06120 (QF06_06120) - 1229298..1230422 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  QF06_RS06125 (QF06_06125) - 1230484..1230729 (+) 246 WP_003232382.1 YkuS family protein -
  QF06_RS06130 (QF06_06130) mscT 1230766..1231569 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  QF06_RS06135 (QF06_06135) ahpA 1231806..1232348 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  QF06_RS06140 (QF06_06140) ykuV 1232418..1232864 (+) 447 WP_041850881.1 thiol-disulfide oxidoreductase YkuV -
  QF06_RS06145 (QF06_06145) rok 1233330..1233914 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  QF06_RS06150 (QF06_06150) cse15 1233955..1234920 (-) 966 WP_041850880.1 spore protein Cse15 -
  QF06_RS06155 (QF06_06155) - 1235057..1235656 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  QF06_RS06160 (QF06_06160) - 1235707..1236726 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  QF06_RS06165 (QF06_06165) glp 1236744..1238036 (+) 1293 WP_041850879.1 gephyrin-like molybdotransferase Glp -
  QF06_RS06170 (QF06_06170) mobB 1237997..1238518 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=133551 QF06_RS06145 WP_014113628.1 1233330..1233914(+) (rok) [Bacillus sp. YP1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=133551 QF06_RS06145 WP_014113628.1 1233330..1233914(+) (rok) [Bacillus sp. YP1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment