Detailed information NTG0133432

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC8_RS13785
• Genome accession: NZ_CP009982
• Coordinates: 2984572..2985579 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FORC_008
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2979572..2990579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC8_RS13765 (FORC8_2638)	rplC	2980106..2980735 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
FORC8_RS13770 (FORC8_2639)	rpsJ	2980750..2981061 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
FORC8_RS13775 (FORC8_2640)	rpmE	2981519..2981740 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
FORC8_RS13780 (FORC8_2641)	priA	2982035..2984239 (+)	2205	WP_025622698.1	primosomal protein N'	-
FORC8_RS13785 (FORC8_2642)	cytR	2984572..2985579 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
FORC8_RS13790 (FORC8_2643)	ftsN	2985754..2986299 (+)	546	WP_005489623.1	cell division protein FtsN	-
FORC8_RS13795 (FORC8_2644)	hslV	2986464..2987015 (+)	552	WP_053047761.1	ATP-dependent protease subunit HslV	-
FORC8_RS13800 (FORC8_2645)	hslU	2987039..2988370 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
FORC8_RS13805 (FORC8_2646)	-	2988555..2989472 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC8_RS13810 (FORC8_2647)	rraA	2989549..2990061 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
FORC8_RS13815 (FORC8_2648)	zapB	2990166..2990408 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=133432 FORC8_RS13785 WP_005481416.1 2984572..2985579(+) (cytR) [Vibrio parahaemolyticus strain FORC_008]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=133432 FORC8_RS13785 WP_005481416.1 2984572..2985579(+) (cytR) [Vibrio parahaemolyticus strain FORC_008]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904