Detailed information NTG0133237

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AKO63_RS21910
• Genome accession: NZ_CP012379
• Coordinates: 4294568..4295593 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain PAR
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4289568..4300593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AKO63_RS21880 (AKO63_4230)	zapB	4289652..4289897 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AKO63_RS21885 (AKO63_4231)	rraA	4289982..4290467 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AKO63_RS21890 (AKO63_4232)	menA	4290560..4291486 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AKO63_RS21895 (AKO63_4233)	hslU	4291553..4292884 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AKO63_RS21900 (AKO63_4234)	hslV	4292894..4293424 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AKO63_RS21905 (AKO63_4235)	ftsN	4293517..4294476 (-)	960	WP_000068847.1	cell division protein FtsN	-
AKO63_RS21910 (AKO63_4236)	cytR	4294568..4295593 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
AKO63_RS21915 (AKO63_4237)	priA	4295749..4297947 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
AKO63_RS21920 (AKO63_4238)	rpmE	4298150..4298362 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AKO63_RS21925 (AKO63_4239)	yiiX	4298423..4299031 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
AKO63_RS21930 (AKO63_4240)	metJ	4299091..4299408 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=133237 AKO63_RS21910 WP_000644911.1 4294568..4295593(-) (cytR) [Escherichia coli strain PAR]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=133237 AKO63_RS21910 WP_000644911.1 4294568..4295593(-) (cytR) [Escherichia coli strain PAR]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625