Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BF28_RS11050 Genome accession   NZ_CP009968
Coordinates   1572316..1572774 (-) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus cereus E33L     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1567316..1577774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BF28_RS11020 (BF28_1673) - 1567427..1568968 (-) 1542 WP_000445738.1 MDR family MFS transporter -
  BF28_RS11025 (BF28_1674) - 1569395..1569895 (+) 501 WP_000708183.1 hypothetical protein -
  BF28_RS11030 (BF28_1675) - 1569927..1570160 (-) 234 WP_000939450.1 SPP1 phage holin family protein -
  BF28_RS11035 (BF28_1676) - 1570325..1570966 (+) 642 WP_000680834.1 diguanylate cyclase domain-containing protein -
  BF28_RS11045 (BF28_1677) - 1571622..1572284 (+) 663 WP_000922495.1 YkyA family protein -
  BF28_RS11050 (BF28_1678) kre 1572316..1572774 (-) 459 WP_000804868.1 YkyB family protein Regulator
  BF28_RS11055 (BF28_1679) ppx 1572952..1574490 (+) 1539 WP_000658864.1 exopolyphosphatase -
  BF28_RS11060 (BF28_1680) - 1574599..1576707 (+) 2109 WP_000422628.1 polyphosphate kinase -
  BF28_RS11065 (BF28_1681) - 1576881..1577117 (-) 237 WP_000283745.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=133231 BF28_RS11050 WP_000804868.1 1572316..1572774(-) (kre) [Bacillus cereus E33L]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=133231 BF28_RS11050 WP_000804868.1 1572316..1572774(-) (kre) [Bacillus cereus E33L]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCAAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGCGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGGACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment