Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BF28_RS09745 | Genome accession | NZ_CP009968 |
| Coordinates | 1357329..1358372 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013208.1 | Uniprot ID | Q634U2 |
| Organism | Bacillus cereus E33L | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1352329..1363372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF28_RS09710 (BF28_1424) | - | 1352585..1352959 (+) | 375 | WP_001012349.1 | nucleoside 2-deoxyribosyltransferase | - |
| BF28_RS09715 (BF28_1425) | - | 1353039..1353527 (+) | 489 | WP_000764246.1 | hypothetical protein | - |
| BF28_RS09720 (BF28_1426) | - | 1353564..1353875 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| BF28_RS09725 (BF28_1427) | - | 1354128..1354343 (+) | 216 | WP_001008322.1 | DUF3912 family protein | - |
| BF28_RS09730 (BF28_1428) | - | 1354559..1355953 (-) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| BF28_RS09735 (BF28_1429) | - | 1356061..1356303 (-) | 243 | WP_000440713.1 | DUF2626 domain-containing protein | - |
| BF28_RS09740 (BF28_1430) | - | 1356429..1357124 (-) | 696 | WP_000434116.1 | helix-turn-helix transcriptional regulator | - |
| BF28_RS09745 (BF28_1431) | comGA | 1357329..1358372 (+) | 1044 | WP_001013208.1 | competence protein ComGA | Machinery gene |
| BF28_RS09750 (BF28_1432) | comGB | 1358365..1359396 (+) | 1032 | WP_000471908.1 | comG operon protein ComGB | - |
| BF28_RS09755 (BF28_1433) | comGC | 1359408..1359707 (+) | 300 | WP_001178682.1 | comG operon protein ComGC | - |
| BF28_RS09760 (BF28_1434) | comGD | 1359704..1360159 (+) | 456 | WP_000810395.1 | comG operon protein ComGD | - |
| BF28_RS09765 (BF28_1435) | comGE | 1360152..1360454 (+) | 303 | WP_000829458.1 | competence type IV pilus minor pilin ComGE | - |
| BF28_RS09770 (BF28_1436) | comGF | 1360424..1360894 (+) | 471 | WP_000923093.1 | competence type IV pilus minor pilin ComGF | - |
| BF28_RS09775 (BF28_1437) | comGG | 1360891..1361262 (+) | 372 | WP_001231187.1 | competence type IV pilus minor pilin ComGG | - |
| BF28_RS09780 (BF28_1438) | - | 1361438..1362088 (+) | 651 | WP_000183877.1 | 2OG-Fe(II) oxygenase | - |
| BF28_RS09785 (BF28_1439) | aroK | 1362209..1362706 (+) | 498 | WP_000836637.1 | shikimate kinase AroK | - |
| BF28_RS09790 (BF28_1440) | - | 1362745..1362945 (+) | 201 | WP_000106081.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39287.78 Da Isoelectric Point: 9.2324
>NTDB_id=133227 BF28_RS09745 WP_001013208.1 1357329..1358372(+) (comGA) [Bacillus cereus E33L]
MNGIESFANTILKEACRVQASDLHIVPRQKDVVIQLRIGKDLMTKQCIEKGFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRSDDLLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGTILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANTILKEACRVQASDLHIVPRQKDVVIQLRIGKDLMTKQCIEKGFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRSDDLLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGTILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=133227 BF28_RS09745 WP_001013208.1 1357329..1358372(+) (comGA) [Bacillus cereus E33L]
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAAGCGTGTAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTAATTCAACTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGGGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACATTGGAGGATCCAGTTGAAAAAAGAAGTGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGACATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAGAGGGACGATACTCAGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAAGCGTGTAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTAATTCAACTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGGGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACATTGGAGGATCCAGTTGAAAAAAGAAGTGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGACATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAGAGGGACGATACTCAGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.349 |
100 |
0.573 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |