Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   OY17_RS20880 Genome accession   NZ_CP009938
Coordinates   897774..897938 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus sp. BH072 isolate honey     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 892774..902938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OY17_RS20875 srfAB 894665..897757 (+) 3093 Protein_859 surfactin non-ribosomal peptide synthetase SrfAB -
  OY17_RS20880 comS 897774..897938 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=133184 OY17_RS20880 WP_269194677.1 897774..897938(+) (comS) [Bacillus sp. BH072 isolate honey]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=133184 OY17_RS20880 WP_269194677.1 897774..897938(+) (comS) [Bacillus sp. BH072 isolate honey]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment