Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SSAL8618_RS08465 Genome accession   NZ_CP009913
Coordinates   1845776..1846891 (-) Length   371 a.a.
NCBI ID   WP_371212477.1    Uniprot ID   -
Organism   Streptococcus salivarius strain NCTC 8618     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1840776..1851891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL8618_RS08440 (SSAL8618_08440) - 1841522..1841842 (+) 321 WP_038676678.1 hypothetical protein -
  SSAL8618_RS08445 (SSAL8618_08445) - 1841889..1843955 (-) 2067 WP_038676680.1 sodium:proton antiporter -
  SSAL8618_RS08450 (SSAL8618_08450) - 1843964..1844206 (-) 243 WP_022495909.1 hypothetical protein -
  SSAL8618_RS08455 (SSAL8618_08455) - 1844203..1844751 (-) 549 WP_038676682.1 class I SAM-dependent methyltransferase -
  SSAL8618_RS08460 (SSAL8618_08460) - 1844748..1845692 (-) 945 WP_038676684.1 TIGR01212 family radical SAM protein -
  SSAL8618_RS08465 (SSAL8618_08465) sepM 1845776..1846891 (-) 1116 WP_371212477.1 SepM family pheromone-processing serine protease Regulator
  SSAL8618_RS08470 (SSAL8618_08470) coaD 1846830..1847327 (-) 498 WP_038676687.1 pantetheine-phosphate adenylyltransferase -
  SSAL8618_RS08475 (SSAL8618_08475) rsmD 1847360..1847908 (-) 549 WP_230955163.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SSAL8618_RS08480 (SSAL8618_08480) trxB 1848049..1849002 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  SSAL8618_RS08485 (SSAL8618_08485) - 1849035..1849259 (-) 225 WP_022495904.1 DUF4059 family protein -
  SSAL8618_RS08490 (SSAL8618_08490) - 1849472..1850215 (-) 744 WP_022495903.1 amino acid ABC transporter ATP-binding protein -
  SSAL8618_RS08495 (SSAL8618_08495) - 1850215..1850961 (-) 747 WP_118189357.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 371 a.a.        Molecular weight: 40629.70 Da        Isoelectric Point: 9.5771

>NTDB_id=132923 SSAL8618_RS08465 WP_371212477.1 1845776..1846891(-) (sepM) [Streptococcus salivarius strain NCTC 8618]
MFLKQLLRKWRPSVAKENASKSILGKLWRIKWWLLSIFTILFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKG
SYNFVAVAQTKATLALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVL
QVADDSSFKGVLNIADTVTAVNGKSFDNSTDLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHT
EVKSPEDVKFKLDGVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPN
NPVTKEMKKADPDAKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1116 bp        

>NTDB_id=132923 SSAL8618_RS08465 WP_371212477.1 1845776..1846891(-) (sepM) [Streptococcus salivarius strain NCTC 8618]
ATGTTCCTCAAGCAGTTGTTAAGGAAGTGGAGGCCAAGCGTGGCAAAAGAGAACGCATCTAAATCGATATTAGGGAAACT
TTGGCGCATCAAGTGGTGGTTATTAAGTATTTTTACGATACTTTTCCTCCTGTTTGCCCTCTTTTTCCCGCTTAATAATT
ATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAAGAAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAGGGA
TCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACTTTGGCCCTCATGCTCTATGCTCAGCTTAATGACTTTGCAAA
GCTTCAAACAGCTGAGGAGGCAACTGGAAATTACTCTGATGAAGATTTCATGCGAATCAATCAATTTTATATGGAGACTT
CGCAAAATCAAGCGATTTATCAGGGTTTGACTCTGGCTGGTAAGGAGGCTAGCTTGGAGTATATGGGTGTCTATGTGCTT
CAAGTGGCTGATGATTCTAGCTTTAAGGGTGTCCTCAATATTGCGGATACAGTGACTGCTGTCAATGGCAAGAGCTTTGA
TAATTCTACTGACTTGATCAAATACGTTCAAGGACTTAAGCTTGGTTCAAAGGTCAAGGTCACTTATACAACAGATGACA
AAGAAAAGACTGCCACTGGTAAAATCATTAAGATTGCCAATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATACC
GAGGTCAAGAGCCCTGAGGATGTGAAGTTTAAACTTGATGGTGTCGGAGGGCCCAGTGCGGGTCTTATGTTTACTCTGGC
AATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGGCCGAAAGATTGCTGGAACAGGGACTATTGAAAAGGATGGCT
CTGTTGGTGATATCGGTGGTGCCTACCTTAAGGTGAAATCAGCGGCTGATAGTGGTGCAGACATTTTCTTTGTACCAAAT
AATCCAGTAACCAAGGAAATGAAAAAGGCTGATCCGGATGCCAAGACTAACTATCAAGAGGCCAAGGAAGCTGCTAAGAA
ACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGCTCAAGAAGCTATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(155-219)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

91.914

0.598


Multiple sequence alignment