Detailed information NTG0132914

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: SSAL8618_RS07450
• Genome accession: NZ_CP009913
• Coordinates: 1643774..1644700 (-)
• Length: 308 a.a.
• NCBI ID: WP_038676509.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NCTC 8618
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1638774..1649700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSAL8618_RS07420 (SSAL8618_07420)	-	1638853..1639647 (-)	795	WP_038676501.1	HAD family hydrolase	-
SSAL8618_RS07425 (SSAL8618_07425)	-	1639829..1640206 (+)	378	WP_022496273.1	GntR family transcriptional regulator	-
SSAL8618_RS07430 (SSAL8618_07430)	-	1640211..1640909 (+)	699	WP_038676503.1	ABC transporter ATP-binding protein	-
SSAL8618_RS07435 (SSAL8618_07435)	-	1640921..1641706 (+)	786	WP_021143813.1	hypothetical protein	-
SSAL8618_RS07440 (SSAL8618_07440)	amiF	1641757..1642686 (-)	930	WP_038676505.1	ATP-binding cassette domain-containing protein	Regulator
SSAL8618_RS07445 (SSAL8618_07445)	amiE	1642679..1643764 (-)	1086	WP_038676507.1	ABC transporter ATP-binding protein	Regulator
SSAL8618_RS07450 (SSAL8618_07450)	amiD	1643774..1644700 (-)	927	WP_038676509.1	oligopeptide ABC transporter permease OppC	Regulator
SSAL8618_RS07455 (SSAL8618_07455)	amiC	1644700..1646193 (-)	1494	WP_038676511.1	ABC transporter permease	Regulator
SSAL8618_RS07460 (SSAL8618_07460)	amiA	1646254..1648224 (-)	1971	WP_038676513.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34619.74 Da
• Isoelectric Point: 9.7054

>NTDB_id=132914 SSAL8618_RS07450 WP_038676509.1 1643774..1644700(-) (amiD) [Streptococcus salivarius strain NCTC 8618]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTTVMLGILIAIILMSFIYPMFSKFDFNDVSKVNDFSVR
YVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFLNVVIGLLVGAVWGISKTFDMIMMEIYNIISNIPALLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTPKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGPPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=132914 SSAL8618_RS07450 WP_038676509.1 1643774..1644700(-) (amiD) [Streptococcus salivarius strain NCTC 8618]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCGCCGGCCTA
TTCATACTGGAAATCGGTGATGCGTCAGTTCTTCAAGAAGAAGTCAACAACTGTCATGTTGGGAATCTTGATTGCTATCA
TTTTGATGAGTTTTATCTACCCGATGTTTTCAAAATTTGACTTTAATGATGTGTCTAAGGTTAATGACTTTAGTGTACGT
TATGTGCATCCAAACGCTCAATACTGGTTCGGTACGGACAGTAATGGTAAGTCCCTCTTCGATAGTGTTTGGTTTGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCCTTAACGTTGTTATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCTGCTCTCCTTGTAGTTATCGTC
TTGACTTACTCATTGGGTGCTGGTTTCTGGAATATGATCTTTGCCATGACTGTTACAGGGTGGATTGGTATTGCCTATAC
TATCCGTATTCAAATCATGCGTTACCGTGATTTGGAGTATAACTTGGCTTCTCGTACACTGGGAACACCAACTCCTAAGA
TTGTGGTTAAAAACATCATGCCACAACTAGTGTCAGTTATCGTAACTATGGCTAGTCAGCTCTTGCCAGGATTTATCTCT
TACGAAGCCTTCCTTTCATACTTTGGTTTAGGGCCTCCTGTTACGACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATCCTCGTTTCCCTTGCTCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGCGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-70)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	98.701	100	0.987
amiD	Streptococcus thermophilus LMG 18311	96.429	100	0.964
amiD	Streptococcus thermophilus LMD-9	96.429	100	0.964