Detailed information NTG0132901

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: SSAL8618_RS04900
• Genome accession: NZ_CP009913
• Coordinates: 1001483..1002364 (+)
• Length: 293 a.a.
• NCBI ID: WP_038675882.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain NCTC 8618
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 996483..1007364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSAL8618_RS04875 (SSAL8618_04875)	-	997016..998437 (+)	1422	WP_038675879.1	DUF4832 domain-containing protein	-
SSAL8618_RS04880 (SSAL8618_04880)	galE	998452..999465 (+)	1014	WP_021144269.1	UDP-glucose 4-epimerase GalE	-
SSAL8618_RS04885 (SSAL8618_04885)	-	999657..999893 (+)	237	WP_037603973.1	DUF1146 family protein	-
SSAL8618_RS04890 (SSAL8618_04890)	murA	999961..1001232 (+)	1272	WP_038675881.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SSAL8618_RS04895 (SSAL8618_04895)	-	1001234..1001422 (+)	189	WP_013990684.1	DNA-directed RNA polymerase subunit beta	-
SSAL8618_RS04900 (SSAL8618_04900)	endA	1001483..1002364 (+)	882	WP_038675882.1	DNA/RNA non-specific endonuclease	Machinery gene
SSAL8618_RS04905 (SSAL8618_04905)	-	1002440..1003090 (-)	651	WP_002886253.1	amino acid ABC transporter permease	-
SSAL8618_RS04910 (SSAL8618_04910)	-	1003102..1003800 (-)	699	WP_002886251.1	amino acid ABC transporter permease	-
SSAL8618_RS04915 (SSAL8618_04915)	-	1003818..1004651 (-)	834	WP_037611665.1	transporter substrate-binding domain-containing protein	-
SSAL8618_RS04920 (SSAL8618_04920)	-	1004661..1005428 (-)	768	WP_038675884.1	amino acid ABC transporter ATP-binding protein	-
SSAL8618_RS04925 (SSAL8618_04925)	vicR	1005728..1006435 (+)	708	WP_002884978.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31566.19 Da
• Isoelectric Point: 10.1795

>NTDB_id=132901 SSAL8618_RS04900 WP_038675882.1 1001483..1002364(+) (endA) [Streptococcus salivarius strain NCTC 8618]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYVGTSNKLSPNNPIKQVASLVSGKSNNYVKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNAIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSETSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=132901 SSAL8618_RS04900 WP_038675882.1 1001483..1002364(+) (endA) [Streptococcus salivarius strain NCTC 8618]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTGATAGCGGTTTTGATTGCAGT
TTTAGGTTACGTTGGAACGAGTAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTACGTCAAATCAAACGGCTCAACAAGTGGGCAGTCTACGCCACAAGAGCAACTCGCAGAGACGGTGATGACC
AGCTCTGTCAAGAGTCAACTAGGAAACGCCATAGAATGGAATGGGGCTGGTGCCTATATTGTTAACGGTAATAAAACCAA
TCTTAATGCTAAGGTATCTAGCCAACCCTACGCTAATAACCAAGTTAAAACGGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTGTTAAGTAAAGCGACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACCTCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGACCGAGGCCATTTGTTAGGTTATGCACT
TGTAGGTGGTCTCAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGCGAAACTTCCACAGGCCAAAACTATTATGAAAGCCTGGTACGTAAAGCTCAGGATAAAAATAAACGTGTCCGT
TATCGCGTTACCCTCATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCAGATGGCTC
GCTTGAGTTCAACGTCTTCGTTCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGGAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	69.96	86.348	0.604
endA	Streptococcus pneumoniae D39	69.96	86.348	0.604
endA	Streptococcus pneumoniae R6	69.96	86.348	0.604
endA	Streptococcus pneumoniae TIGR4	69.96	86.348	0.604