Detailed information NTG0132732

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: KR76_RS15425
• Genome accession: NZ_CP009896
• Coordinates: 3118537..3119589 (-)
• Length: 350 a.a.
• NCBI ID: WP_038679506.1
• Uniprot ID: -
• Organism: Pimelobacter simplex strain VKM Ac-2033D
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3113537..3124589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KR76_RS15395 (KR76_15395)	-	3113705..3114448 (+)	744	WP_038679499.1	sirohydrochlorin chelatase	-
KR76_RS29630 (KR76_15400)	-	3114542..3114961 (-)	420	WP_038679501.1	DUF3037 domain-containing protein	-
KR76_RS29635 (KR76_15405)	-	3114958..3115734 (-)	777	WP_038679503.1	HipA family kinase	-
KR76_RS15410 (KR76_15410)	-	3115737..3116603 (-)	867	WP_052138728.1	PPK2 family polyphosphate kinase	-
KR76_RS15415 (KR76_15415)	-	3116613..3117137 (-)	525	WP_052138729.1	phosphoribosyltransferase	-
KR76_RS15420 (KR76_15420)	-	3117124..3117699 (-)	576	WP_082003680.1	regulatory protein RecX	-
KR76_RS15425 (KR76_15425)	recA	3118537..3119589 (-)	1053	WP_038679506.1	recombinase RecA	Machinery gene
KR76_RS15430 (KR76_15430)	-	3119781..3121037 (-)	1257	WP_141267275.1	MFS transporter	-
KR76_RS15435 (KR76_15435)	-	3121034..3121228 (-)	195	WP_038679509.1	DUF3046 domain-containing protein	-
KR76_RS15440 (KR76_15440)	-	3121225..3121770 (-)	546	WP_038679511.1	DinB family protein	-
KR76_RS15445 (KR76_15445)	-	3121820..3122347 (-)	528	WP_141267274.1	hypothetical protein	-
KR76_RS15450 (KR76_15450)	-	3122370..3123332 (-)	963	WP_038679515.1	DUF389 domain-containing protein	-
KR76_RS15455 (KR76_15455)	-	3123337..3123900 (-)	564	WP_174823537.1	DM13 domain-containing protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37260.38 Da
• Isoelectric Point: 4.7256

>NTDB_id=132732 KR76_RS15425 WP_038679506.1 3118537..3119589(-) (recA) [Pimelobacter simplex strain VKM Ac-2033D]
MAGDDRQKALDAALLNIEKSYGKGSVMRLGDDSRAPLDVIPTGSISLDVALGIGGLPRGRVVEIYGPESSGKTTVALHSV
ASAQAAGGIVAFIDAEHALDPDYAKALGVDTDALLVSQPDSGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKMTGALNQSKTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRIETLKDGTDMVGN
RTRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLIRKAGAWYTYEGDQLGQGKENARTFLKDNPDLANELE
KKILEKLGVTPTVEGDFTDLSDEPIGVDSF

Nucleotide

• Length: 1053 bp

>NTDB_id=132732 KR76_RS15425 WP_038679506.1 3118537..3119589(-) (recA) [Pimelobacter simplex strain VKM Ac-2033D]
ATGGCTGGAGACGACCGCCAGAAGGCCCTCGACGCTGCGCTTCTCAACATCGAGAAGTCGTACGGCAAGGGCTCCGTGAT
GCGACTCGGTGACGACTCGCGCGCCCCCCTCGACGTGATCCCGACCGGATCCATCTCCCTCGACGTCGCTCTCGGCATCG
GTGGTCTCCCGCGCGGACGGGTCGTGGAGATCTACGGCCCCGAGTCGAGCGGTAAGACCACCGTCGCGCTCCACTCGGTG
GCCAGCGCCCAGGCCGCCGGCGGCATCGTCGCCTTCATCGACGCCGAGCACGCCCTCGACCCCGACTACGCCAAGGCCCT
CGGCGTCGACACCGACGCCCTCCTGGTCTCCCAGCCCGACTCCGGTGAGCAGGCCCTCGAGATCGCCGACATGCTCATCC
GCTCCGGCGCCCTCGACCTCATCGTGATCGACTCCGTCGCGGCCCTCGTGCCCCGCGCCGAGATCGAGGGCGAGATGGGC
GACAGCCACGTCGGCCTCCAGGCCCGCCTGATGAGCCAGGCCCTCCGCAAGATGACCGGTGCCCTCAACCAGTCCAAGAC
CACCGCCATCTTCATCAACCAGCTGCGCGAGAAGATCGGCGTCATGTTCGGCTCGCCCGAGACCACCACCGGTGGCCGCG
CGCTGAAGTTCTACTCCTCCGTCCGCCTCGACGTCCGCCGCATCGAGACCCTCAAGGACGGCACCGACATGGTCGGCAAC
CGGACCCGGGTCAAGGTCGTCAAGAACAAGGTCGCCCCGCCCTTCAAGCAGGCCGAGTTCGACATCATGTACGGCAAGGG
CATCTCCCGCGAGGGTGGCCTCATCGACGTCGGCGTCGAGGCAGGCCTCATCCGCAAGGCCGGCGCCTGGTACACCTACG
AGGGCGACCAGCTCGGCCAGGGCAAGGAGAACGCCCGCACCTTCCTCAAGGACAACCCGGACCTGGCCAACGAGCTGGAG
AAGAAGATCCTCGAGAAGCTCGGCGTCACCCCCACCGTCGAGGGCGACTTCACCGACCTCTCCGACGAGCCGATCGGCGT
CGACTCGTTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	63.689	99.143	0.631
recA	Bacillus subtilis subsp. subtilis str. 168	66.769	92.857	0.62
recA	Streptococcus mutans UA159	63.45	97.714	0.62
recA	Pseudomonas stutzeri DSM 10701	66.055	93.429	0.617
recA	Ralstonia pseudosolanacearum GMI1000	67.937	90	0.611
recA	Vibrio cholerae strain A1552	65.741	92.571	0.609
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.741	92.571	0.609
recA	Streptococcus pneumoniae D39	60.745	99.714	0.606
recA	Streptococcus pneumoniae Rx1	60.745	99.714	0.606
recA	Streptococcus pneumoniae R6	60.745	99.714	0.606
recA	Streptococcus pneumoniae TIGR4	60.745	99.714	0.606
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.17	97.429	0.606
recA	Streptococcus pyogenes NZ131	64.242	94.286	0.606
recA	Acinetobacter baumannii D1279779	64.134	94	0.603
recA	Acinetobacter baylyi ADP1	65.123	92.571	0.603
recA	Neisseria gonorrhoeae MS11	65.421	91.714	0.6
recA	Neisseria gonorrhoeae MS11	65.421	91.714	0.6
recA	Neisseria gonorrhoeae strain FA1090	65.421	91.714	0.6
recA	Streptococcus mitis NCTC 12261	62.538	94.571	0.591
recA	Streptococcus mitis SK321	62.538	94.571	0.591
recA	Helicobacter pylori 26695	60.35	98	0.591
recA	Helicobacter pylori strain NCTC11637	60.35	98	0.591
recA	Lactococcus lactis subsp. cremoris KW2	63.077	92.857	0.586
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.121	94.286	0.586
recA	Glaesserella parasuis strain SC1401	59.357	97.714	0.58
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.125	91.714	0.551