Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | OB04_RS12605 | Genome accession | NZ_CP009796 |
| Coordinates | 2437506..2438543 (-) | Length | 345 a.a. |
| NCBI ID | WP_015714257.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SG6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2432506..2443543
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OB04_RS12555 (OB04_02460) | tasA | 2432604..2433389 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| OB04_RS12560 (OB04_02461) | sipW | 2433453..2434025 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| OB04_RS12565 (OB04_02462) | tapA | 2434009..2434770 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| OB04_RS12570 (OB04_02463) | yqzG | 2435042..2435368 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| OB04_RS12575 (OB04_02464) | spoIITA | 2435410..2435589 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| OB04_RS12580 (OB04_02465) | comGG | 2435660..2436034 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| OB04_RS12585 | comGF | 2436035..2436418 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| OB04_RS12590 (OB04_02467) | comGE | 2436444..2436791 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| OB04_RS12595 (OB04_02468) | comGD | 2436775..2437206 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| OB04_RS12600 (OB04_02469) | comGC | 2437196..2437492 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| OB04_RS12605 (OB04_02470) | comGB | 2437506..2438543 (-) | 1038 | WP_015714257.1 | comG operon protein ComGB | Machinery gene |
| OB04_RS12610 (OB04_02471) | comGA | 2438530..2439600 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| OB04_RS12625 (OB04_02474) | corA | 2440012..2440965 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| OB04_RS12630 (OB04_02475) | yqhB | 2441108..2442433 (+) | 1326 | WP_038429293.1 | hemolysin family protein | - |
| OB04_RS12635 (OB04_02476) | rsbRD | 2442490..2443326 (-) | 837 | WP_038429294.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39733.22 Da Isoelectric Point: 9.7900
>NTDB_id=132343 OB04_RS12605 WP_015714257.1 2437506..2438543(-) (comGB) [Bacillus subtilis strain SG6]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=132343 OB04_RS12605 WP_015714257.1 2437506..2438543(-) (comGB) [Bacillus subtilis strain SG6]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACTGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACTGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |