Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   OB04_RS07810 Genome accession   NZ_CP009796
Coordinates   1454048..1454623 (+) Length   191 a.a.
NCBI ID   WP_038428901.1    Uniprot ID   -
Organism   Bacillus subtilis strain SG6     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449048..1459623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OB04_RS07780 (OB04_01526) dapD 1449235..1449945 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  OB04_RS07785 (OB04_01527) dapI 1450015..1451139 (+) 1125 WP_038428899.1 N-acetyldiaminopimelate deacetylase -
  OB04_RS07790 (OB04_01528) ykuS 1451201..1451446 (+) 246 WP_003232382.1 YkuS family protein -
  OB04_RS07795 (OB04_01529) mscT 1451483..1452286 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  OB04_RS07800 (OB04_01530) ahpA 1452523..1453065 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  OB04_RS07805 (OB04_01531) ykuV 1453136..1453582 (+) 447 WP_038428900.1 thiol-disulfide oxidoreductase YkuV -
  OB04_RS07810 (OB04_01532) rok 1454048..1454623 (+) 576 WP_038428901.1 transcriptional regulator Rok Regulator
  OB04_RS07815 (OB04_01533) cse15 1454664..1455629 (-) 966 WP_029317734.1 spore protein Cse15 -
  OB04_RS07820 (OB04_01534) mobA 1455766..1456365 (+) 600 WP_038428902.1 molybdenum cofactor guanylyltransferase -
  OB04_RS07825 (OB04_01535) moeB 1456416..1457435 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  OB04_RS07830 (OB04_01536) glp 1457453..1458745 (+) 1293 WP_038428903.1 gephyrin-like molybdotransferase Glp -
  OB04_RS07835 (OB04_01537) mobB 1458706..1459227 (+) 522 WP_038428904.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21829.81 Da        Isoelectric Point: 9.8633

>NTDB_id=132327 OB04_RS07810 WP_038428901.1 1454048..1454623(+) (rok) [Bacillus subtilis strain SG6]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQSQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=132327 OB04_RS07810 WP_038428901.1 1454048..1454623(+) (rok) [Bacillus subtilis strain SG6]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGTCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.476

100

0.995

Multiple sequence alignment