Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   OB04_RS07705 Genome accession   NZ_CP009796
Coordinates   1438169..1438633 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SG6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433169..1443633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OB04_RS07685 (OB04_01508) kinA 1433636..1435456 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  OB04_RS07690 (OB04_01509) dapX 1435466..1436647 (-) 1182 WP_038428893.1 aminotransferase A -
  OB04_RS21505 (OB04_01510) - 1436849..1437010 (-) 162 WP_003245246.1 hypothetical protein -
  OB04_RS07700 (OB04_01511) cheV 1437214..1438125 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  OB04_RS07705 (OB04_01512) kre 1438169..1438633 (-) 465 WP_003232406.1 YkyB family protein Regulator
  OB04_RS07710 (OB04_01513) ykuC 1438759..1440051 (-) 1293 WP_015252195.1 MFS transporter -
  OB04_RS07715 (OB04_01514) ltdD 1440127..1440621 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  OB04_RS07720 (OB04_01515) ppeE 1440678..1441538 (-) 861 WP_003232400.1 metallophosphoesterase -
  OB04_RS07725 (OB04_01516) fadH 1441681..1442445 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=132326 OB04_RS07705 WP_003232406.1 1438169..1438633(-) (kre) [Bacillus subtilis strain SG6]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=132326 OB04_RS07705 WP_003232406.1 1438169..1438633(-) (kre) [Bacillus subtilis strain SG6]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment