Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OB04_RS04675 Genome accession   NZ_CP009796
Coordinates   887786..888580 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus subtilis strain SG6     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 882786..893580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OB04_RS04645 (OB04_00917) sxzA 883625..884656 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  OB04_RS04650 (OB04_00918) yfhB 884771..885652 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  OB04_RS04655 (OB04_00919) yfhC 885740..886324 (+) 585 WP_003243940.1 nitroreductase -
  OB04_RS04660 (OB04_00920) yfhD 886363..886554 (-) 192 WP_038428644.1 YfhD family protein -
  OB04_RS21375 (OB04_00921) yfhE 886621..886731 (-) 111 WP_003223230.1 YfhE family protein -
  OB04_RS04670 (OB04_00922) yfhF 886786..887697 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  OB04_RS04675 (OB04_00923) recX 887786..888580 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  OB04_RS04680 (OB04_00924) yfhH 888582..888896 (+) 315 WP_038428648.1 YfhH family protein -
  OB04_RS04690 (OB04_00925) yfhI 889040..890233 (+) 1194 WP_003243500.1 MFS transporter -
  OB04_RS04695 (OB04_00926) sspK 890265..890417 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  OB04_RS04700 (OB04_00927) yfhJ 890542..890811 (+) 270 WP_003243789.1 YfhJ family protein -
  OB04_RS04705 (OB04_00928) yfhK 890956..891474 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  OB04_RS04710 (OB04_00929) spdL 891559..891876 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  OB04_RS04715 (OB04_00930) ephM 891878..892738 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=132309 OB04_RS04675 WP_038428646.1 887786..888580(+) (recX) [Bacillus subtilis strain SG6]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=132309 OB04_RS04675 WP_038428646.1 887786..888580(+) (recX) [Bacillus subtilis strain SG6]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTTAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment