Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | OB04_RS00175 | Genome accession | NZ_CP009796 |
| Coordinates | 26761..27051 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SG6 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 21761..32051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OB04_RS00135 (OB04_00026) | darA | 21784..22113 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| OB04_RS00140 (OB04_00027) | yaaR | 22126..22566 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| OB04_RS00145 (OB04_00028) | holB | 22578..23567 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| OB04_RS00150 (OB04_00029) | ricT | 23570..24397 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| OB04_RS00155 (OB04_00030) | yabA | 24412..24771 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| OB04_RS00160 (OB04_00031) | trmNF | 24830..25573 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| OB04_RS00165 (OB04_00032) | yazA | 25560..25859 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| OB04_RS00170 (OB04_00033) | rsmI | 25834..26712 (+) | 879 | WP_038428262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| OB04_RS00175 (OB04_00034) | abrB | 26761..27051 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| OB04_RS00180 (OB04_00035) | metG | 27546..29540 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| OB04_RS00185 (OB04_00036) | dayD | 29620..30387 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| OB04_RS00190 (OB04_00037) | yabE | 30543..31856 (+) | 1314 | WP_038428263.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=132299 OB04_RS00175 WP_003226760.1 26761..27051(-) (abrB) [Bacillus subtilis strain SG6]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=132299 OB04_RS00175 WP_003226760.1 26761..27051(-) (abrB) [Bacillus subtilis strain SG6]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |