Detailed information NTG0132210

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: AEI23_RS02590
• Genome accession: NZ_CP012221
• Coordinates: 459319..461892 (-)
• Length: 857 a.a.
• NCBI ID: WP_057035911.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CJ018CCUA
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 454319..466892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AEI23_RS02580 (AEI23_02590)	maf	456812..457363 (+)	552	WP_115766760.1	septum formation inhibitor Maf	-
AEI23_RS02585 (AEI23_02595)	pbpA	457360..459291 (+)	1932	WP_057035910.1	penicillin-binding protein 1A	-
AEI23_RS02590 (AEI23_02600)	clpC	459319..461892 (-)	2574	WP_057035911.1	AAA family ATPase	Regulator
AEI23_RS02595 (AEI23_02605)	-	462004..462294 (-)	291	WP_002859054.1	metal-sensing transcriptional repressor	-
AEI23_RS02600 (AEI23_02610)	-	462412..463746 (+)	1335	WP_002873408.1	S41 family peptidase	-
AEI23_RS02605 (AEI23_02615)	purC	463748..464458 (+)	711	WP_002854922.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	-
AEI23_RS02610 (AEI23_02620)	purS	464467..464712 (+)	246	WP_002857003.1	phosphoribosylformylglycinamidine synthase subunit PurS	-
AEI23_RS02615 (AEI23_02625)	purQ	464714..465386 (+)	673	Protein_514	phosphoribosylformylglycinamidine synthase I	-
AEI23_RS02620 (AEI23_02630)	-	465358..466554 (+)	1197	WP_002873406.1	SH3 domain-containing protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 95515.66 Da
• Isoelectric Point: 5.2764

>NTDB_id=132210 AEI23_RS02590 WP_057035911.1 459319..461892(-) (clpC) [Campylobacter jejuni strain CJ018CCUA]
MANIQDFLTDNMLSNLESAASLAIHSKNTEVVPLHLLWALSVDSTSILNQILNKLNISKEALELEIKSRISKLATSSNVN
RENIRFSNELINSLENAKGLMSANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLD
SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIA
LDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR
KYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYITDRFLPDKAIDLIDEAAAE
LKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEID
LLKNEASLAKARGEFQKAAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQ
KFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEF
MEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILT
SNIASSAIMNLSGKEQEDAVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAAL
LIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKKA

Nucleotide

• Length: 2574 bp

>NTDB_id=132210 AEI23_RS02590 WP_057035911.1 459319..461892(-) (clpC) [Campylobacter jejuni strain CJ018CCUA]
ATGGCAAATATACAAGATTTTTTAACTGATAATATGCTTTCAAACCTTGAAAGTGCAGCATCTTTAGCTATACATTCTAA
AAATACTGAAGTCGTACCTTTGCACCTTTTATGGGCTTTAAGCGTAGATAGTACAAGTATTTTAAATCAAATTTTAAATA
AATTAAATATTTCTAAAGAAGCCTTAGAACTTGAAATTAAAAGCAGAATTTCAAAACTTGCAACGAGTTCAAATGTAAAC
CGTGAAAATATACGCTTTTCCAATGAACTTATAAATTCATTAGAAAATGCTAAAGGATTAATGAGTGCTAATGGAGATAG
TTATTTAAGTGTGGATACTTGGCTTATAAGTGAAAGTCAAAAAAGTCCTATTAAAGAAATTTTGGCGCAATTTTTAGATT
TAAGAGAATTTCAAAAAGAGCTTGAAAGTCTAAGAGCGGGACGCAAAATCGATAGCAAAACAAGCGATGAAACCTTAGAT
AGTTTAAATAAATTTGGTATAGATTTAACCTTAAAAGCAAGCGAAGGTAAACTTGATCCTGTTATAGGTAGAGAAGAAGA
AATCGAACGTTTAATGCAAATTTTAATACGCAAAACCAAAAACAACCCTATACTTTTAGGTGAACCAGGTGTAGGAAAAA
CAGCTATAGTGGAAGCTTTAGCACAAAGAATTATCAAAAAAGATGTTCCAAAATCTTTGCAAAATAAAAAAGTCATCGCT
CTTGATATGAGTGCTTTAATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGATAGATTAAAAGCTGTGGTTAATGAAGT
GATAAAAAGTGAAAATATCATTCTTTTTATCGATGAAATTCACACTATAGTAGGAGCTGGAGCGAGTGAAGGCAGCATGG
ATGCGGCAAATATTTTAAAACCTGCTCTTGCAAGAGGTGAACTCCATACCATAGGCGCAACTACTTTAAAAGAATATCGT
AAATATTTTGAAAAAGATGCAGCCTTGCAACGCCGTTTTCAACCTGTAAATGTAGGTGAGCCAAGTGTTAATGAGGCTTT
GGCTATGTTAAGGGGTATAAAAGAAAAGCTTGAAATTCATCATAATGTAACCATAAATGATAGTGCTTTAGTAGCCGCAG
CTAAACTTTCAAAGCGTTATATAACAGATCGTTTTTTACCTGATAAGGCCATTGATTTAATCGATGAAGCTGCAGCTGAA
CTGAAAATGCAAATTGAAAGCGAACCAAGTTCTTTAAGAAAAGTACGCAAAGATATAGAAACTTTAGAAGTTGAAAATGA
AGCTTTAAAAATGGAAAATGATGAAAAAAATCAAAAAAGACTCGATGAAATCGCAAAAGAACTAGCTAATTTAAAAGAAA
AACAAAATGCCCTAAATTCACAGTTTGAAAATGAAAAAAGTGTTTTTGATGGCATAAGTGCTAAGAAAAAAGAAATTGAT
CTGCTTAAAAATGAAGCTTCTTTGGCTAAAGCTAGAGGTGAATTTCAAAAAGCAGCCGAGCTAGAGTATGGAAAAATTCC
AAGTCTTGAAAAAGAAGTAGAAATTTTAGAAGATAAATGGAAAAAAATGAGTGAAAATGGAGTTTTACTTAAAAATCAAG
TGGATGAGGATTTGGTTGCTGGAATTTTAAGCAAATGGACGGGTATTAGCGTGCAAAAAATGTTAACTTCTGAAAAACAA
AAATTCTTAGAAGTGGAAAAACATTTAAAAGAAAGTGTCATAGGACAAGATAAGGCCTTAAGTGCTTTAGCTAGAGCCAT
TAAACGTAACAAAGCAGGGCTTAATGCGGACAATAAACCTATAGGAAGCTTTTTATTTTTAGGGCCAACAGGGGTAGGAA
AAACACAATCGGCTAAAGCTTTGGCAAAATTTTTATTTGATGATGAAAAAGCAATGATTCGCTTTGATATGAGTGAATTT
ATGGAAAAACATAGTGTTTCAAGACTCTTAGGTGCGCCTCCAGGATATATAGGACATGAAGAAGGTGGAGAGCTTACTGA
AGCCGTACGAAGAAAACCTTATAGCGTGCTTTTGTTTGATGAAGTTGAAAAAGCACATAAAGATGTATTTAATGTGCTTT
TAGGGATTTTAGATGATGGTAGAGCAACCGATAGCAAAGGTGTAACAGTGGATTTTAAAAATACCATTATCATTCTAACT
TCTAATATCGCCTCAAGCGCTATTATGAATTTAAGCGGAAAAGAACAAGAAGATGCGGTAAAAAATGAGTTAAAAAATTT
CTTTAAACCTGAGTTTTTAAACCGTTTAGATGATATTATCACCTTTAATCCACTTGGAAAAGATGAAGCTTATGAAATAG
TCAAGCTTTTATTTAAAGATTTACAAATGAGCTTAGAAAACAAGGGAATAAAAGCAAGTTTAAGCGAAAATGCAGCCCTT
TTAATCGCTAAAGATGGTTTTGACCCTGATTTTGGTGCTAGACCTTTAAGAAGAGCTATTTATGATCTTATAGAAGATAA
ATTAAGCGATATGATACTTGCTGATGAACTTCATGAAAATGATAGCATTATCATTGATGCAAAAGATGATGAAATAATCA
TCAAAAAAGCTTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (765-844)

• AAA lid domain (AAA_lid_9) (342-444)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (19-70)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-145)

• AAA domain (Cdc48 subfamily) (AAA_2) (599-759)

• ATPase family associated with various cellular activities (AAA) (AAA) (204-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	43.787	98.6	0.432
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.332	100	0.42