Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   AEI20_RS07200 Genome accession   NZ_CP012217
Coordinates   1349960..1350454 (+) Length   164 a.a.
NCBI ID   WP_002857890.1    Uniprot ID   Q9PN97
Organism   Campylobacter jejuni strain CJ071CC464     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344960..1355454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI20_RS07185 (AEI20_07215) - 1346346..1347524 (-) 1179 WP_032585038.1 metal-dependent hydrolase -
  AEI20_RS07190 (AEI20_07220) gpsA 1347534..1348430 (-) 897 WP_002859277.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  AEI20_RS07195 (AEI20_07225) gatB 1348427..1349845 (-) 1419 WP_115791413.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB -
  AEI20_RS07200 (AEI20_07230) luxS 1349960..1350454 (+) 495 WP_002857890.1 S-ribosylhomocysteine lyase Regulator
  AEI20_RS07205 (AEI20_07235) - 1350766..1351758 (+) 993 WP_002858100.1 isopenicillin N synthase family oxygenase -
  AEI20_RS07210 (AEI20_07240) - 1351769..1352539 (+) 771 WP_205212279.1 MetQ/NlpA family ABC transporter substrate-binding protein -
  AEI20_RS07215 (AEI20_07245) metE 1352551..1354815 (+) 2265 WP_040966618.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -

Sequence

Protein


Download         Length: 164 a.a.        Molecular weight: 18209.18 Da        Isoelectric Point: 6.6314

>NTDB_id=132142 AEI20_RS07200 WP_002857890.1 1349960..1350454(+) (luxS) [Campylobacter jejuni strain CJ071CC464]
MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPNKDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISP
MGCRTGFYMSLIGTPDEKSIAKAWEAAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIINNKELK
LENA

Nucleotide


Download         Length: 495 bp        

>NTDB_id=132142 AEI20_RS07200 WP_002857890.1 1349960..1350454(+) (luxS) [Campylobacter jejuni strain CJ071CC464]
ATGCCATTATTAGACAGCTTTAAAGTTGACCATACTAAAATGCCAGCTCCTGCTGTGCGTTTAGCTAAAGTTATGAAAAC
ACCTAAGGGTGATGATATTAGCGTATTTGATTTGCGTTTTTGCATACCAAATAAAGACATTATGAGCGAAAAAGGTACTC
ATACCTTAGAACATTTATTCGCAGGATTTATGAGAGATCATCTTAATTCAAATTCAGTTGAAATTATTGATATTTCACCT
ATGGGTTGTCGCACGGGTTTTTATATGAGTTTAATTGGAACACCTGATGAGAAAAGTATTGCAAAAGCTTGGGAAGCAGC
CATGAAAGATGTTTTAAGCGTAAGCGATCAAAGCAAAATTCCTGAACTTAATATCTACCAATGCGGAACTTGCGCAATGC
ATTCTTTAGATGAAGCCAAACAAATTGCCCAAAAAGTTTTAAATCTAGGTATTAGCATAATAAATAACAAAGAATTAAAA
CTCGAGAATGCTTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-154)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9PN97

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

72.05

98.171

0.707