Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   EC036_RS07730 Genome accession   NZ_CP009756
Coordinates   1660461..1661087 (+) Length   208 a.a.
NCBI ID   WP_013097255.1    Uniprot ID   A0A427KI93
Organism   Enterobacter cloacae strain GGT036     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1655461..1666087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EC036_RS07710 (EC036_15070) - 1655861..1657621 (-) 1761 WP_038419042.1 Lon protease family protein -
  EC036_RS07715 (EC036_15080) matP 1657808..1658260 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  EC036_RS07720 (EC036_15090) ompA 1658324..1659379 (-) 1056 WP_014883252.1 porin OmpA -
  EC036_RS07725 (EC036_15100) sulA 1659734..1660243 (-) 510 WP_013097256.1 SOS-induced cell division inhibitor SulA -
  EC036_RS07730 (EC036_15110) sxy/tfoX 1660461..1661087 (+) 627 WP_013097255.1 TfoX/Sxy family DNA transformation protein Regulator
  EC036_RS07735 (EC036_15120) yccS 1661044..1663206 (-) 2163 WP_038419043.1 YccS family putative transporter -
  EC036_RS07740 (EC036_15130) - 1663226..1663672 (-) 447 WP_013097253.1 YccF domain-containing protein -
  EC036_RS07745 (EC036_15140) helD 1663795..1665849 (+) 2055 WP_038419044.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 24000.57 Da        Isoelectric Point: 9.2254

>NTDB_id=131912 EC036_RS07730 WP_013097255.1 1660461..1661087(+) (sxy/tfoX) [Enterobacter cloacae strain GGT036]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=131912 EC036_RS07730 WP_013097255.1 1660461..1661087(+) (sxy/tfoX) [Enterobacter cloacae strain GGT036]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTAGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTGTGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATCCAGCGCTACCAGCGAAACCGACTAAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTCCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCGCTCAGTATCAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAGGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A427KI93

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment