Detailed information NTG0131904

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: AEI26_RS05870
• Genome accession: NZ_CP012212
• Coordinates: 1110897..1111847 (+)
• Length: 316 a.a.
• NCBI ID: WP_070298520.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CJ017CCUA
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1105897..1116847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AEI26_RS09250 (AEI26_05785)	-	1106257..1107268 (-)	1012	Protein_1133	hypothetical protein	-
AEI26_RS05850 (AEI26_05790)	-	1107339..1108112 (+)	774	WP_070298411.1	glycosyltransferase family 25 protein	-
AEI26_RS05855 (AEI26_05795)	wlaTB	1108105..1109061 (+)	957	WP_070298410.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
AEI26_RS05860 (AEI26_05800)	wlaTC	1109058..1110017 (+)	960	WP_070298409.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
AEI26_RS05865 (AEI26_05805)	-	1110020..1110838 (-)	819	WP_070298408.1	glycosyltransferase family 2 protein	-
AEI26_RS05870 (AEI26_05810)	waaF	1110897..1111847 (+)	951	WP_070298520.1	lipopolysaccharide heptosyltransferase II	Regulator
AEI26_RS05875 (AEI26_05815)	-	1112066..1112685 (-)	620	Protein_1139	IS607 family transposase	-
AEI26_RS05880 (AEI26_05820)	-	1112685..1113317 (-)	633	WP_070298519.1	zeta toxin family protein	-
AEI26_RS05885 (AEI26_05825)	gmhA	1113413..1113985 (-)	573	WP_070298518.1	D-sedoheptulose 7-phosphate isomerase	-
AEI26_RS05890 (AEI26_05830)	rfaE1	1113982..1115367 (-)	1386	WP_070286070.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
AEI26_RS05895 (AEI26_05835)	rfaD	1115360..1116313 (-)	954	WP_070240085.1	ADP-glyceromanno-heptose 6-epimerase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36177.77 Da
• Isoelectric Point: 10.2575

>NTDB_id=131904 AEI26_RS05870 WP_070298520.1 1110897..1111847(+) (waaF) [Campylobacter jejuni strain CJ017CCUA]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALIFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKIKTVAIFGPTKFTQTSPWQNENAKLVHSDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTL

Nucleotide

• Length: 951 bp

>NTDB_id=131904 AEI26_RS05870 WP_070298520.1 1110897..1111847(+) (waaF) [Campylobacter jejuni strain CJ017CCUA]
ATGAAAATTTTTATACATCTTCCCACTTGGTTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCTACGGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAATTTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTTATCACAAATGATAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGATAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAACGAAAACGCAAAATTAGTGCATTCAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACCCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.208	99.051	0.943