Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   AEI26_RS00215 Genome accession   NZ_CP012212
Coordinates   33967..35472 (-) Length   501 a.a.
NCBI ID   WP_070298458.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ017CCUA     
Function   interact with DprA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28967..40472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI26_RS00185 (AEI26_00185) - 29169..30353 (-) 1185 WP_002892648.1 metallophosphoesterase -
  AEI26_RS00190 (AEI26_00190) - 30363..30572 (-) 210 WP_002933768.1 alkylphosphonate utilization protein -
  AEI26_RS00195 (AEI26_00195) - 30565..31284 (-) 720 WP_052781291.1 TerC family protein -
  AEI26_RS00200 (AEI26_00200) purN 31356..31922 (-) 567 WP_002866343.1 phosphoribosylglycinamide formyltransferase -
  AEI26_RS00205 (AEI26_00205) - 31913..33283 (-) 1371 WP_052949935.1 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase -
  AEI26_RS00210 (AEI26_00210) - 33267..33965 (-) 699 WP_052949937.1 NYN domain-containing protein -
  AEI26_RS00215 (AEI26_00215) comM 33967..35472 (-) 1506 WP_070298458.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  AEI26_RS00220 (AEI26_00220) def 35469..35996 (-) 528 WP_002870676.1 peptide deformylase -
  AEI26_RS00225 (AEI26_00225) clpP 36032..36616 (-) 585 WP_002861003.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP -
  AEI26_RS00230 (AEI26_00230) tig 36616..37950 (-) 1335 WP_070274903.1 trigger factor -
  AEI26_RS00235 (AEI26_00235) folE 38093..38665 (+) 573 WP_002851990.1 GTP cyclohydrolase I FolE -
  AEI26_RS00240 (AEI26_00240) fliI 38665..40050 (+) 1386 WP_002854283.1 flagellar protein export ATPase FliI -

Sequence

Protein


Download         Length: 501 a.a.        Molecular weight: 56514.54 Da        Isoelectric Point: 8.4703

>NTDB_id=131882 AEI26_RS00215 WP_070298458.1 33967..35472(-) (comM) [Campylobacter jejuni strain CJ017CCUA]
MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASVAIKESIERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDL
AIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
FKEKNYENFHFSHNHPLFTNPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLV
YIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIE
SLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISK
DDKTSISSKEMSEKILQAFIFGKKREQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADL
EQSLNINKTHILEALSFRARN

Nucleotide


Download         Length: 1506 bp        

>NTDB_id=131882 AEI26_RS00215 WP_070298458.1 33967..35472(-) (comM) [Campylobacter jejuni strain CJ017CCUA]
ATGAAAAAACTAAAGTGCATAAGCTTTCATGAAGGCTTAGACATTATAGAGGTAGAATCCACTTTTACAAGAGGTTTGCC
AAATTTAAGCATAGTAGGACTTGCAAGTGTAGCGATTAAGGAAAGTATCGAACGCATCAAAGCCACGCTTTTAAGTTGTG
ATTTTGCTTTTCCTGCTAAAAAAATTACTATCAATCTTAGTCCTTCAGGCATCCCAAAAAAGGGATCTCATTTTGATTTG
GCCATTGCTTTATTAATCCTTTTGCAAAATGAAGAATTAGATGACTTTTTTGTAGTAGGAGAATTAGGACTTGATGGAAG
TATTAAAAGCACTAACGAGCTTTTTTCTTTGCTTTTGTTTCTCTCTGCTAAAATTAAAAAAGCTAAAATCGTTGTTCCAA
AAAGCATAGCTCAAAAAGCTTCCATGATACCAAATTTGGAGGTTTATGGACTTGAAAATTTAAATGAAGCAATAGAGTTT
TTTAAAGAAAAAAATTATGAAAATTTTCACTTCTCGCACAATCATCCTTTATTTACAAACCCTTTGCAAATAGAAAATGA
AATTTTTTTACAAAATATGGATTTTAAACTTGATTTTAAAGACATCAAAGGGCAGGAAAAAGCTAAAAGAGCTTGTATGA
TAGCTGCTTTAGGTATGCATAATATCTTATTTGAAGGAAGTCCAGGAAGTGGTAAAAGTATGTGTGCTAAACGCCTTGTT
TATATCATGCCTCCTCAAAGTTTAAGTGAAATTTTAATGCAAAATGCTTATATGTCTTTAGATTCAAAAGATTGTGAATT
TACTAAAATTCGTGCTTTTCGTCATCCTCATCATACTTCTACAAGAGCAAGTATTTTTGGCGGAGGAACAAAAAATGCTA
GAATTGGAGAAGTCGCACTTGCAAATGGTGGAGTATTGTTTTTTGATGAATTTCCACATTTTAACAAGCAAATCATAGAG
AGTTTAAGAGAGCCTTTAGAGGATCATAAAATTCATATTTCAAGAGTAAATTCTAAAATCACTTATGAAACAAAATTTAG
CTTTATAGCTGCCCAAAATCCTTGTCCTTGCGGAAATTTATTTTCTAAAAATCTTTCTTGTGTTTGTAGTGAAAATGAGA
TTAAAAAATACAAAAATCACATTTCAGCTCCTATTATGGATAGGATTGATCTTTATGTAGCTATGGATGAGATCAGCAAG
GATGATAAAACGAGTATAAGTTCTAAAGAAATGAGTGAAAAAATTTTACAAGCTTTTATTTTTGGTAAAAAACGGGAGCA
AAAAGAATTTAATGGGAAATTAAAAGATGAAGATTTAAGTCGTTTTTGTGTATTGGAAAAAGATGCCAAAGATACACTAG
ATTTAGCAATTTCACGTTATAATCTTTCTTTGCGATCACTCAATAAAATTTTAAAAGTTTCAAGAAGTATAGCGGATTTA
GAACAAAGTCTTAATATTAACAAAACCCATATTTTAGAAGCTTTAAGCTTTAGAGCAAGGAATTAA

Domains

Predicted by InterProScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(407-498)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(198-400)

Subunit ChlI of Mg-chelatase (ChlI)

(18-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Helicobacter pylori 26695

47.495

99.601

0.473