Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | AEI10_RS02540 | Genome accession | NZ_CP012210 |
| Coordinates | 467922..468305 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain CJ515CC45 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 462922..473305
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI10_RS02520 (AEI10_02495) | - | 463001..464935 (-) | 1935 | WP_004309024.1 | ribonuclease R family protein | - |
| AEI10_RS02525 (AEI10_02500) | ilvC | 465054..466076 (+) | 1023 | WP_002921147.1 | ketol-acid reductoisomerase | - |
| AEI10_RS02530 (AEI10_02505) | - | 466080..467162 (+) | 1083 | WP_002876692.1 | divergent polysaccharide deacetylase family protein | - |
| AEI10_RS02535 (AEI10_02510) | dprA | 467152..467925 (+) | 774 | WP_022552258.1 | DNA-processing protein DprA | Machinery gene |
| AEI10_RS02540 (AEI10_02515) | dprB | 467922..468305 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| AEI10_RS02545 (AEI10_02520) | - | 468334..469173 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| AEI10_RS02550 (AEI10_02525) | msrA | 469349..469846 (-) | 498 | WP_002866497.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| AEI10_RS02555 (AEI10_02530) | ppa | 469887..470405 (-) | 519 | WP_002855031.1 | inorganic diphosphatase | - |
| AEI10_RS02560 (AEI10_02535) | adk | 470415..470993 (-) | 579 | WP_002855137.1 | adenylate kinase | - |
| AEI10_RS02565 (AEI10_02540) | aspS | 470990..472741 (-) | 1752 | WP_012006668.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=131799 AEI10_RS02540 WP_002852281.1 467922..468305(+) (dprB) [Campylobacter jejuni strain CJ515CC45]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=131799 AEI10_RS02540 WP_002852281.1 467922..468305(+) (dprB) [Campylobacter jejuni strain CJ515CC45]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |