Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BWEI_RS03665 Genome accession   NZ_CP009746
Coordinates   681887..682681 (+) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus mycoides strain WSBC10204     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 676887..687681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWEI_RS03650 (bwei_0762) argR 677729..678178 (+) 450 WP_002015076.1 arginine repressor ArgR -
  BWEI_RS03655 (bwei_0763) recN 678449..680188 (+) 1740 WP_002088564.1 DNA repair protein RecN Machinery gene
  BWEI_RS03660 (bwei_0764) spoIVB 680308..681600 (+) 1293 WP_002015079.1 SpoIVB peptidase -
  BWEI_RS03665 (bwei_0766) spo0A 681887..682681 (+) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  BWEI_RS03670 (bwei_0767) - 682868..683140 (+) 273 WP_227590929.1 site-specific integrase -
  BWEI_RS03675 (bwei_0768) - 683500..684111 (+) 612 WP_407707707.1 sigma-70 family RNA polymerase sigma factor -
  BWEI_RS03680 (bwei_0769) - 684276..685499 (+) 1224 WP_002033949.1 WXG100 family type VII secretion target -
  BWEI_RS03685 (bwei_0770) - 685523..685996 (+) 474 WP_012261694.1 SMI1/KNR4 family protein -
  BWEI_RS03690 (bwei_0771) - 686201..686653 (+) 453 WP_002033951.1 YrhA family protein -
  BWEI_RS03695 (bwei_0772) - 686672..686947 (+) 276 Protein_750 SMI1/KNR4 family protein -
  BWEI_RS28005 - 686950..687376 (+) 427 Protein_751 hypothetical protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=131776 BWEI_RS03665 WP_002015081.1 681887..682681(+) (spo0A) [Bacillus mycoides strain WSBC10204]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=131776 BWEI_RS03665 WP_002015081.1 681887..682681(+) (spo0A) [Bacillus mycoides strain WSBC10204]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAAAAGCAGCCTGATATACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGATCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACTGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTAAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment