Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BWEI_RS03320 | Genome accession | NZ_CP009746 |
| Coordinates | 628508..629551 (+) | Length | 347 a.a. |
| NCBI ID | WP_002014996.1 | Uniprot ID | R8I3I9 |
| Organism | Bacillus mycoides strain WSBC10204 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 623508..634551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWEI_RS03290 (bwei_0686) | - | 623760..624248 (+) | 489 | WP_033709428.1 | hypothetical protein | - |
| BWEI_RS03295 (bwei_0687) | - | 624285..624596 (-) | 312 | WP_033709427.1 | hypothetical protein | - |
| BWEI_RS03300 (bwei_0688) | - | 624849..625064 (+) | 216 | WP_002034026.1 | DUF3912 family protein | - |
| BWEI_RS29445 | - | 625152..625545 (+) | 394 | Protein_668 | hypothetical protein | - |
| BWEI_RS03305 (bwei_0690) | - | 625626..627020 (-) | 1395 | WP_033709426.1 | L-cystine transporter | - |
| BWEI_RS03310 (bwei_0691) | - | 627127..627369 (-) | 243 | WP_002015110.1 | DUF2626 domain-containing protein | - |
| BWEI_RS03315 (bwei_0692) | - | 627607..628302 (-) | 696 | WP_002034023.1 | helix-turn-helix transcriptional regulator | - |
| BWEI_RS03320 (bwei_0693) | comGA | 628508..629551 (+) | 1044 | WP_002014996.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BWEI_RS03325 (bwei_0694) | comGB | 629538..630575 (+) | 1038 | WP_033709425.1 | competence type IV pilus assembly protein ComGB | - |
| BWEI_RS03330 (bwei_0695) | comGC | 630587..630886 (+) | 300 | WP_002088623.1 | competence type IV pilus major pilin ComGC | - |
| BWEI_RS03335 (bwei_0696) | comGD | 630883..631338 (+) | 456 | WP_002088622.1 | competence type IV pilus minor pilin ComGD | - |
| BWEI_RS03340 (bwei_0697) | - | 631331..631627 (+) | 297 | WP_002190667.1 | hypothetical protein | - |
| BWEI_RS03345 (bwei_0698) | comGF | 631611..632072 (+) | 462 | WP_033709424.1 | competence type IV pilus minor pilin ComGF | - |
| BWEI_RS03350 (bwei_0699) | comGG | 632069..632440 (+) | 372 | WP_033709423.1 | competence type IV pilus minor pilin ComGG | - |
| BWEI_RS03355 (bwei_0700) | - | 632614..633264 (+) | 651 | WP_002034016.1 | 2OG-Fe(II) oxygenase | - |
| BWEI_RS03360 (bwei_0702) | - | 633416..633913 (+) | 498 | WP_002129082.1 | shikimate kinase | - |
| BWEI_RS03365 (bwei_0703) | - | 633952..634152 (+) | 201 | WP_002015009.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39264.73 Da Isoelectric Point: 9.3368
>NTDB_id=131774 BWEI_RS03320 WP_002014996.1 628508..629551(+) (comGA) [Bacillus mycoides strain WSBC10204]
MNSVELFANMIMKEACRVQASDLHIVPRQKDVAIQLRIGKDLITKRCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSSAEKLLSFLKHSHGLLVFTGPTGSGKTTTMYALLEV
ARKWQTRRIITLEDPVEQRKDGLLQIQINEKAGITYKTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCATLCKSMRKVRQASIYELLYGYELKQAIKEASGEH
VTYHYKTLESSVRKGYALGFLEEDVYV
MNSVELFANMIMKEACRVQASDLHIVPRQKDVAIQLRIGKDLITKRCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSSAEKLLSFLKHSHGLLVFTGPTGSGKTTTMYALLEV
ARKWQTRRIITLEDPVEQRKDGLLQIQINEKAGITYKTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAILRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCATLCKSMRKVRQASIYELLYGYELKQAIKEASGEH
VTYHYKTLESSVRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=131774 BWEI_RS03320 WP_002014996.1 628508..629551(+) (comGA) [Bacillus mycoides strain WSBC10204]
ATGAATAGTGTCGAGCTTTTTGCAAATATGATTATGAAAGAAGCTTGTAGGGTGCAAGCATCGGACTTACATATTGTGCC
CAGGCAGAAGGATGTGGCGATTCAATTACGTATTGGAAAAGATTTAATTACGAAACGGTGTATTGAGAAAGAATTTGGAG
AAAAGCTTGTTTCACACTTTAAATTTTTAGCATCAATGGATATAGGAGAGAGGAGAAAACCTCAAAATGGTTCGTTGTAC
TTACAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
CCATTTACAAGCATCTGTACAGCCACTGTCTCATCTTTCGTTATTTCCAAGTTCAGCGGAAAAATTACTCTCTTTTTTAA
AGCATTCTCATGGGTTACTCGTATTTACTGGGCCAACTGGTTCTGGAAAAACAACAACAATGTATGCGTTATTAGAAGTA
GCTAGAAAATGGCAAACACGTCGCATCATTACACTGGAAGATCCAGTTGAGCAAAGAAAAGACGGTTTATTACAAATTCA
AATAAATGAAAAAGCTGGTATCACATATAAAACGGGATTAAAGGCTATTTTGCGTCATGATCCAGATATTATTTTAGTTG
GCGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTAAGGGCCAGTTTGACGGGACATTTAGTAATGACAACCTTGCAT
ACAAATGATGCGAAAGGAGCGATACTACGATTTATGGATTATGGTATTACAAGGCAAGAAATTGAACAATCATTATTAGC
AGTAGCTGCTCAGCGGCTCGTCGAATTAAAATGTCCATTTTGCAGAGGGAAGTGTGCAACTTTATGTAAATCAATGAGGA
AAGTGAGACAGGCAAGCATTTATGAACTGTTATATGGATATGAATTAAAACAAGCGATTAAAGAAGCAAGTGGAGAACAT
GTTACGTATCACTATAAAACGTTGGAATCGTCGGTTCGAAAAGGGTATGCTTTAGGCTTTTTAGAAGAAGATGTATATGT
TTAA
ATGAATAGTGTCGAGCTTTTTGCAAATATGATTATGAAAGAAGCTTGTAGGGTGCAAGCATCGGACTTACATATTGTGCC
CAGGCAGAAGGATGTGGCGATTCAATTACGTATTGGAAAAGATTTAATTACGAAACGGTGTATTGAGAAAGAATTTGGAG
AAAAGCTTGTTTCACACTTTAAATTTTTAGCATCAATGGATATAGGAGAGAGGAGAAAACCTCAAAATGGTTCGTTGTAC
TTACAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
CCATTTACAAGCATCTGTACAGCCACTGTCTCATCTTTCGTTATTTCCAAGTTCAGCGGAAAAATTACTCTCTTTTTTAA
AGCATTCTCATGGGTTACTCGTATTTACTGGGCCAACTGGTTCTGGAAAAACAACAACAATGTATGCGTTATTAGAAGTA
GCTAGAAAATGGCAAACACGTCGCATCATTACACTGGAAGATCCAGTTGAGCAAAGAAAAGACGGTTTATTACAAATTCA
AATAAATGAAAAAGCTGGTATCACATATAAAACGGGATTAAAGGCTATTTTGCGTCATGATCCAGATATTATTTTAGTTG
GCGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTAAGGGCCAGTTTGACGGGACATTTAGTAATGACAACCTTGCAT
ACAAATGATGCGAAAGGAGCGATACTACGATTTATGGATTATGGTATTACAAGGCAAGAAATTGAACAATCATTATTAGC
AGTAGCTGCTCAGCGGCTCGTCGAATTAAAATGTCCATTTTGCAGAGGGAAGTGTGCAACTTTATGTAAATCAATGAGGA
AAGTGAGACAGGCAAGCATTTATGAACTGTTATATGGATATGAATTAAAACAAGCGATTAAAGAAGCAAGTGGAGAACAT
GTTACGTATCACTATAAAACGTTGGAATCGTCGGTTCGAAAAGGGTATGCTTTAGGCTTTTTAGAAGAAGATGTATATGT
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.349 |
100 |
0.573 |
| pilB | Glaesserella parasuis strain SC1401 |
43.151 |
84.15 |
0.363 |