Detailed information NTG0131748

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: AEI02_RS02275
• Genome accession: NZ_CP012206
• Coordinates: 424187..426760 (-)
• Length: 857 a.a.
• NCBI ID: WP_002866404.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CJ067CC45
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 419187..431760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AEI02_RS02265 (AEI02_02270)	maf	421680..422231 (+)	552	WP_002866403.1	septum formation inhibitor Maf	-
AEI02_RS02270 (AEI02_02275)	pbpA	422228..424159 (+)	1932	WP_002857099.1	penicillin-binding protein 1A	-
AEI02_RS02275 (AEI02_02280)	clpC	424187..426760 (-)	2574	WP_002866404.1	AAA family ATPase	Regulator
AEI02_RS02280 (AEI02_02285)	-	426872..427162 (-)	291	WP_002855280.1	metal-sensing transcriptional repressor	-
AEI02_RS02285 (AEI02_02290)	-	427280..428614 (+)	1335	WP_002856815.1	S41 family peptidase	-
AEI02_RS02290 (AEI02_02295)	purC	428616..429326 (+)	711	WP_002854922.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	-
AEI02_RS02295 (AEI02_02300)	purS	429335..429580 (+)	246	WP_002866405.1	phosphoribosylformylglycinamidine synthase subunit PurS	-
AEI02_RS02300 (AEI02_02305)	purQ	429582..430254 (+)	673	Protein_442	phosphoribosylformylglycinamidine synthase I	-
AEI02_RS02305 (AEI02_02310)	-	430226..431422 (+)	1197	WP_002877649.1	SH3 domain-containing protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 95485.59 Da
• Isoelectric Point: 5.3329

>NTDB_id=131748 AEI02_RS02275 WP_002866404.1 424187..426760(-) (clpC) [Campylobacter jejuni strain CJ067CC45]
MANIQNFLTDNMLSNLESAASLAIHSKNNEVAPLHLLWALSVDSTSILNQILNKLNISKEALELEIKSRISKLATSSNVN
RENIRFSNELINSLENAKGLMSANGDSYLSVDTWLISESQKSPTKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLD
SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVEALAQRIIKKDVPKSLQNKKVIA
LDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYR
KYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAIDLIDEAAAE
LKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEID
LLKNEASLAKARGEFQKAAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQ
KFLEVEKHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRFDMSEF
MEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILT
SNIASSAIMNLSGKEQEDVVKNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAAL
LIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKKA

Nucleotide

• Length: 2574 bp

>NTDB_id=131748 AEI02_RS02275 WP_002866404.1 424187..426760(-) (clpC) [Campylobacter jejuni strain CJ067CC45]
ATGGCAAATATACAAAATTTTCTAACTGATAATATGCTTTCAAACCTTGAAAGCGCAGCATCTTTAGCTATACATTCTAA
AAATAATGAAGTTGCACCTTTACATCTTTTATGGGCTTTAAGCGTAGATAGTACAAGTATTTTAAATCAAATTTTAAATA
AATTAAATATTTCCAAAGAAGCCTTAGAACTTGAAATTAAAAGCAGAATTTCAAAACTTGCAACGAGTTCAAATGTAAAC
CGTGAAAATATACGCTTTTCCAATGAACTTATAAATTCATTAGAAAATGCTAAAGGATTAATGAGTGCTAATGGAGATAG
TTATTTAAGTGTGGATACTTGGCTTATAAGTGAAAGTCAAAAAAGTCCTACTAAAGAAATTTTGGCGCAATTTTTAGATT
TAAGAGAATTTCAAAAAGAGCTTGAAAGTCTAAGAGCGGGACGCAAAATCGATAGCAAAACAAGCGATGAAACCTTAGAC
AGCTTAAATAAATTTGGTATAGATTTAACCTTAAAAGCAAGCGAAGGTAAACTTGATCCTGTTATAGGCAGAGAAGAAGA
AATCGAACGTTTAATGCAAATTTTAATACGCAAAACCAAAAATAACCCTATACTTTTAGGTGAACCAGGCGTAGGAAAAA
CAGCTATAGTGGAAGCTTTAGCACAAAGAATTATTAAAAAAGATGTTCCAAAATCTTTGCAAAATAAAAAAGTTATCGCT
CTTGACATGAGTGCTTTAATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGACAGATTAAAAGCTGTCGTTAATGAAGT
GATAAAAAGTGAAAATATCATTCTTTTTATCGATGAAATTCACACTATAGTAGGAGCTGGAGCGAGTGAAGGCAGTATGG
ATGCGGCAAATATTTTAAAACCTGCTCTTGCAAGAGGTGAACTCCATACTATAGGCGCAACTACTTTAAAAGAATATCGT
AAATATTTTGAAAAAGATGCAGCCTTGCAACGCCGTTTTCAACCTGTAAATGTAGGTGAGCCAAGCGTTAATGAGGCTTT
GGCTATGTTAAGGGGTATAAAAGAAAAGCTTGAAATTCATCATAATGTAACTATAAATGATAGCGCTTTAGTAGCTGCAG
CTAAACTTTCAAAGCGTTATATAGCGGATCGTTTTTTACCTGATAAGGCCATTGATTTAATCGATGAAGCTGCAGCTGAA
CTGAAAATGCAAATTGAAAGCGAACCAAGTTCTTTAAGAAAAGTACGCAAAGATATAGAAACTTTAGAAGTTGAAAATGA
AGCTTTAAAAATGGAAAATGACGAGAAAAATCAAAAAAGACTTGATGAAATCGCAAAAGAACTAGCCAATTTAAAAGAAA
AACAAAATGCCTTAAATTCACAGTTTGAAAATGAAAAAAGTGTTTTTGATGGCATAAGTGCTAAGAAAAAAGAAATTGAT
CTGCTTAAAAATGAAGCTTCTTTGGCTAAAGCTAGAGGTGAATTTCAAAAAGCAGCCGAGCTAGAGTATGGAAAAATTCC
AAGTCTTGAAAAAGAAGTAGAAATTTTAGAAGATAAATGGAAAAAAATGAGTGAAAATGGAGTTTTACTTAAAAATCAAG
TGGATGAGGATTTGGTTGCTGGAATTTTAAGCAAATGGACGGGTATTAGCGTGCAAAAAATGTTAACTTCTGAAAAACAA
AAATTCTTAGAAGTGGAAAAACATTTAAAAGAAAGTGTCATAGGACAAGATAAGGCCTTAAGTGCTTTAGCTAGAGCCAT
TAAACGCAACAAAGCAGGACTTAATGCGGACAATAAACCTATAGGAAGCTTTTTATTTTTAGGGCCAACAGGGGTAGGAA
AAACACAATCAGCTAAAGCTTTGGCAAAATTTTTATTTGACGATGAAAAAGCAATGATTCGCTTTGATATGAGTGAATTT
ATGGAAAAACATAGTGTTTCAAGACTCTTAGGCGCACCTCCAGGGTACATAGGACATGAAGAAGGTGGAGAACTTACTGA
AGCTGTGCGAAGAAAACCTTATAGCGTGCTTTTGTTTGATGAAGTTGAAAAAGCACATAAAGATGTATTTAATGTGCTTT
TAGGGATTTTAGATGATGGTAGAGCAACCGATAGCAAAGGTGTAACAGTGGATTTTAAAAATACCATTATCATTTTAACT
TCTAATATTGCCTCAAGCGCTATTATGAATTTAAGCGGAAAAGAACAAGAAGATGTGGTAAAAAATGAGTTAAAAAATTT
CTTTAAACCTGAGTTTTTAAACCGCTTAGATGATATTATCACCTTTAATCCACTTGGAAAAGATGAAGCTTATGAAATAG
TTAAGCTTTTATTTAAAGATTTACAAATGAGCTTAGAAAACAAGGGGATAAAAGCGAGTTTAAGCGAAAATGCAGCCCTT
TTAATCGCTAAAGATGGTTTTGATCCTGATTTTGGTGCTAGACCTTTAAGAAGAGCTATTTATGATCTTATAGAAGATAA
ATTAAGCGATATGATACTTGCTGATGAACTTCATGAAAATGATAGCATTATCATTGATGCAAAAGATGATGAAATAATCA
TCAAAAAAGCTTAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (204-316)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (765-844)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-145)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (19-70)

• AAA lid domain (AAA_lid_9) (342-444)

• AAA domain (Cdc48 subfamily) (AAA_2) (599-759)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	43.407	100	0.434
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.217	100	0.419