Detailed information NTG0131634

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ADZ28_RS20225
• Genome accession: NZ_CP012127
• Coordinates: 4097838..4098863 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DH1Ec169
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4092838..4103863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ADZ28_RS20195 (ADZ28_20220)	zapB	4092922..4093167 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ADZ28_RS20200 (ADZ28_20225)	rraA	4093252..4093737 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ADZ28_RS20205 (ADZ28_20230)	menA	4093830..4094756 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ADZ28_RS20210 (ADZ28_20235)	hslU	4094823..4096154 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ADZ28_RS20215 (ADZ28_20240)	hslV	4096164..4096694 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ADZ28_RS20220 (ADZ28_20245)	ftsN	4096787..4097746 (-)	960	WP_000068828.1	cell division protein FtsN	-
ADZ28_RS20225 (ADZ28_20250)	cytR	4097838..4098863 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ADZ28_RS20230 (ADZ28_20255)	priA	4099019..4101217 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ADZ28_RS20235 (ADZ28_20260)	rpmE	4101420..4101632 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ADZ28_RS20240 (ADZ28_20265)	yiiX	4101693..4102301 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ADZ28_RS20245 (ADZ28_20270)	metJ	4102485..4102802 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=131634 ADZ28_RS20225 WP_000644904.1 4097838..4098863(-) (cytR) [Escherichia coli strain DH1Ec169]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=131634 ADZ28_RS20225 WP_000644904.1 4097838..4098863(-) (cytR) [Escherichia coli strain DH1Ec169]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628