Detailed information NTG0131596

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BF36_RS25565
• Genome accession: NZ_CP009720
• Coordinates: 4761776..4762903 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus thuringiensis strain HD682
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4756776..4767903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BF36_RS25555 (BF36_4946)	gyrA	4757255..4759726 (-)	2472	WP_001282851.1	DNA gyrase subunit A	-
BF36_RS25560 (BF36_4947)	gyrB	4759815..4761737 (-)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BF36_RS25565 (BF36_4948)	recF	4761776..4762903 (-)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
BF36_RS25570 (BF36_4949)	yaaA	4762916..4763128 (-)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
BF36_RS25575 (BF36_4950)	dnaN	4763256..4764395 (-)	1140	WP_001212527.1	DNA polymerase III subunit beta	-
BF36_RS25580 (BF36_4951)	dnaA	4764574..4765914 (-)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
BF36_RS25585 (BF36_4952)	rpmH	4766480..4766614 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
BF36_RS25590 (BF36_4953)	rnpA	4766691..4767050 (+)	360	WP_000726628.1	ribonuclease P protein component	-
BF36_RS25595 (BF36_4954)	spoIIIJ	4767090..4767857 (+)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=131596 BF36_RS25565 WP_000470750.1 4761776..4762903(-) (recF) [Bacillus thuringiensis strain HD682]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=131596 BF36_RS25565 WP_000470750.1 4761776..4762903(-) (recF) [Bacillus thuringiensis strain HD682]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCAAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651