Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BF36_RS04435 | Genome accession | NZ_CP009720 |
| Coordinates | 716210..717253 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013197.1 | Uniprot ID | A0AAE9TCD1 |
| Organism | Bacillus thuringiensis strain HD682 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 711210..722253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF36_RS04400 (BF36_774) | - | 711449..711823 (+) | 375 | WP_001012351.1 | nucleoside 2-deoxyribosyltransferase | - |
| BF36_RS04405 (BF36_775) | - | 711903..712391 (+) | 489 | WP_042510864.1 | hypothetical protein | - |
| BF36_RS04410 (BF36_776) | - | 712428..712739 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| BF36_RS04415 (BF36_777) | - | 712992..713207 (+) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| BF36_RS04420 (BF36_778) | - | 713439..714833 (-) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| BF36_RS04425 (BF36_779) | - | 714941..715183 (-) | 243 | WP_000440711.1 | DUF2626 domain-containing protein | - |
| BF36_RS04430 (BF36_780) | - | 715309..716004 (-) | 696 | WP_000434117.1 | helix-turn-helix transcriptional regulator | - |
| BF36_RS04435 (BF36_781) | comGA | 716210..717253 (+) | 1044 | WP_001013197.1 | competence protein ComGA | Machinery gene |
| BF36_RS04440 (BF36_782) | comGB | 717246..718277 (+) | 1032 | WP_000471907.1 | comG operon protein ComGB | - |
| BF36_RS04445 (BF36_783) | comGC | 718289..718588 (+) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| BF36_RS04450 (BF36_784) | comGD | 718585..719040 (+) | 456 | WP_000810395.1 | comG operon protein ComGD | - |
| BF36_RS04455 (BF36_785) | comGE | 719033..719335 (+) | 303 | WP_000829456.1 | competence type IV pilus minor pilin ComGE | - |
| BF36_RS04460 (BF36_786) | comGF | 719305..719775 (+) | 471 | WP_000923094.1 | competence type IV pilus minor pilin ComGF | - |
| BF36_RS04465 (BF36_787) | comGG | 719772..720143 (+) | 372 | WP_001231192.1 | competence type IV pilus minor pilin ComGG | - |
| BF36_RS04470 (BF36_788) | - | 720319..720969 (+) | 651 | WP_000183878.1 | 2OG-Fe(II) oxygenase | - |
| BF36_RS04475 (BF36_789) | aroK | 721090..721587 (+) | 498 | WP_000836643.1 | shikimate kinase AroK | - |
| BF36_RS04480 (BF36_790) | - | 721626..721826 (+) | 201 | WP_000106085.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39397.95 Da Isoelectric Point: 9.0635
>NTDB_id=131566 BF36_RS04435 WP_001013197.1 716210..717253(+) (comGA) [Bacillus thuringiensis strain HD682]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKILLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKILLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=131566 BF36_RS04435 WP_001013197.1 716210..717253(+) (comGA) [Bacillus thuringiensis strain HD682]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATACTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGCCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGATACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATTGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTAGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATACTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGCCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGATACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATTGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTAGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |