Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BG05_RS25250 Genome accession   NZ_CP009692
Coordinates   4572228..4572404 (-) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain ATCC 6462     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4567228..4577404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG05_RS25225 - 4567591..4567800 (+) 210 WP_003187948.1 hypothetical protein -
  BG05_RS25230 (BG05_4718) - 4567797..4568543 (-) 747 WP_002030367.1 YjbA family protein -
  BG05_RS25235 (BG05_4719) - 4568685..4569476 (-) 792 WP_003187941.1 DUF2268 domain-containing protein -
  BG05_RS25240 (BG05_4720) fabF 4569592..4570830 (-) 1239 WP_002030364.1 beta-ketoacyl-ACP synthase II -
  BG05_RS25245 (BG05_4721) fabH 4570862..4571794 (-) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  BG05_RS25250 (BG05_4722) comZ 4572228..4572404 (-) 177 WP_002011319.1 ComZ family protein Regulator
  BG05_RS25255 (BG05_4723) - 4572469..4573341 (-) 873 WP_002086991.1 NAD-dependent epimerase/dehydratase family protein -
  BG05_RS25260 (BG05_4724) - 4573371..4574105 (-) 735 WP_002030268.1 hydrolase -
  BG05_RS25265 (BG05_4725) - 4574261..4574443 (+) 183 WP_001211111.1 YjzD family protein -
  BG05_RS25270 (BG05_4726) clpB 4574477..4577077 (-) 2601 WP_003187936.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=131298 BG05_RS25250 WP_002011319.1 4572228..4572404(-) (comZ) [Bacillus mycoides strain ATCC 6462]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=131298 BG05_RS25250 WP_002011319.1 4572228..4572404(-) (comZ) [Bacillus mycoides strain ATCC 6462]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment