Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BG05_RS04200 | Genome accession | NZ_CP009692 |
| Coordinates | 450432..450716 (+) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides strain ATCC 6462 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 445432..455716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG05_RS04185 (BG05_467) | rnmV | 446179..446736 (-) | 558 | WP_002029323.1 | ribonuclease M5 | - |
| BG05_RS04190 (BG05_468) | - | 446997..447764 (-) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| BG05_RS04195 (BG05_469) | metG | 447930..449912 (-) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| BG05_RS04200 (BG05_470) | abrB | 450432..450716 (+) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BG05_RS04205 (BG05_471) | rsmI | 450737..451612 (-) | 876 | WP_002130208.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BG05_RS04210 (BG05_472) | - | 451581..451871 (-) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| BG05_RS04215 (BG05_473) | - | 451858..452598 (-) | 741 | WP_003186802.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BG05_RS04220 (BG05_474) | yabA | 452719..453069 (-) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| BG05_RS04225 (BG05_475) | - | 453084..453911 (-) | 828 | WP_002009637.1 | stage 0 sporulation family protein | - |
| BG05_RS04230 (BG05_476) | holB | 453917..454900 (-) | 984 | WP_003186798.1 | DNA polymerase III subunit delta' | - |
| BG05_RS04235 (BG05_477) | tmk | 454936..455562 (-) | 627 | WP_002130202.1 | dTMP kinase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=131260 BG05_RS04200 WP_000843037.1 450432..450716(+) (abrB) [Bacillus mycoides strain ATCC 6462]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=131260 BG05_RS04200 WP_000843037.1 450432..450716(+) (abrB) [Bacillus mycoides strain ATCC 6462]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTTGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |