Detailed information NTG0131231

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FORC5_RS25820
• Genome accession: NZ_CP009686
• Coordinates: 5027363..5028712 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225361.1
• Uniprot ID: -
• Organism: Bacillus cereus strain FORC_005
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5022363..5033712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC5_RS25800 (FORC5_4881)	secA	5022691..5025198 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
FORC5_RS25805 (FORC5_4882)	raiA	5025473..5026015 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
FORC5_RS25810 (FORC5_4883)	cspC	5026338..5026535 (-)	198	WP_001990088.1	cold shock protein CspC	-
FORC5_RS25815 (FORC5_4884)	-	5026662..5027363 (-)	702	WP_033687567.1	ComF family protein	-
FORC5_RS25820 (FORC5_4885)	comFA	5027363..5028712 (-)	1350	WP_000225361.1	ATP-dependent helicase ComFA	Machinery gene
FORC5_RS25825 (FORC5_4886)	-	5028840..5030252 (-)	1413	WP_000499475.1	C40 family peptidase	-
FORC5_RS25830 (FORC5_4887)	-	5030407..5030721 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FORC5_RS25835 (FORC5_4888)	-	5030894..5031736 (-)	843	WP_000684725.1	DegV family protein	-
FORC5_RS25840 (FORC5_4889)	-	5031973..5032608 (+)	636	WP_000926672.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51147.06 Da
• Isoelectric Point: 10.0895

>NTDB_id=131231 FORC5_RS25820 WP_000225361.1 5027363..5028712(-) (comFA) [Bacillus cereus strain FORC_005]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMHLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTKAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=131231 FORC5_RS25820 WP_000225361.1 5027363..5028712(-) (comFA) [Bacillus cereus strain FORC_005]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTATTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGCACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAAAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	53.11	93.096	0.494