Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FORC5_RS19925 Genome accession   NZ_CP009686
Coordinates   3953181..3953639 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain FORC_005     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3948181..3958639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC5_RS19910 (FORC5_3775) - 3948850..3949086 (+) 237 WP_000283738.1 hypothetical protein -
  FORC5_RS19915 (FORC5_3776) - 3949248..3951356 (-) 2109 WP_046392975.1 polyphosphate kinase -
  FORC5_RS19920 (FORC5_3777) ppx 3951465..3953039 (-) 1575 WP_052733438.1 exopolyphosphatase -
  FORC5_RS19925 (FORC5_3778) kre 3953181..3953639 (+) 459 WP_000804864.1 YkyB family protein Regulator
  FORC5_RS19930 (FORC5_3779) - 3953671..3954333 (-) 663 WP_000922498.1 YkyA family protein -
  FORC5_RS19935 (FORC5_3780) - 3954959..3955600 (-) 642 WP_046392977.1 diguanylate cyclase -
  FORC5_RS19940 (FORC5_3781) - 3955764..3955997 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  FORC5_RS19945 (FORC5_3782) - 3956029..3956529 (-) 501 WP_000708120.1 hypothetical protein -
  FORC5_RS19950 (FORC5_3783) - 3956942..3958483 (+) 1542 WP_000449912.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=131216 FORC5_RS19925 WP_000804864.1 3953181..3953639(+) (kre) [Bacillus cereus strain FORC_005]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=131216 FORC5_RS19925 WP_000804864.1 3953181..3953639(+) (kre) [Bacillus cereus strain FORC_005]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATCGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGCCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment