Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ADJ80_RS06750 Genome accession   NZ_CP012067
Coordinates   1425689..1426321 (-) Length   210 a.a.
NCBI ID   WP_005700182.1    Uniprot ID   A0AAP7GZG1
Organism   Aggregatibacter aphrophilus strain W10433     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1420689..1431321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ADJ80_RS06750 (ADJ80_06780) sxy/tfoX 1425689..1426321 (-) 633 WP_005700182.1 TfoX/Sxy family protein Regulator
  ADJ80_RS06755 (ADJ80_06785) fdhE 1426621..1427538 (-) 918 WP_050693477.1 formate dehydrogenase accessory protein FdhE -
  ADJ80_RS06760 (ADJ80_06790) - 1427628..1428743 (-) 1116 WP_050693478.1 pyridoxal phosphate-dependent aminotransferase -
  ADJ80_RS06765 (ADJ80_06795) - 1428867..1429286 (+) 420 WP_050693479.1 YgiW/YdeI family stress tolerance OB fold protein -
  ADJ80_RS06770 (ADJ80_06800) ciaR 1429382..1430053 (+) 672 WP_050693480.1 response regulator Regulator

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24346.72 Da        Isoelectric Point: 10.3131

>NTDB_id=131209 ADJ80_RS06750 WP_005700182.1 1425689..1426321(-) (sxy/tfoX) [Aggregatibacter aphrophilus strain W10433]
MSNIISQLQLEFSELIEDVKVKNLFNGHGIFHQDIMFALHQNGSIYIKAEGDLVSYLEKLGAVAYAINHDSMKKLALYNY
YQLPNSIRRNKEKFKEILILAIKQAKAKKLSDELSKKERIKELANFSIKHERLLAKVNIYTVTEYRKLGAYHSFIRLKKL
GIPANIDLLWTFIAALKNKHVSLLSEEEKKKKLIKLNDLLESNGLRKMKM

Nucleotide


Download         Length: 633 bp        

>NTDB_id=131209 ADJ80_RS06750 WP_005700182.1 1425689..1426321(-) (sxy/tfoX) [Aggregatibacter aphrophilus strain W10433]
ATGAGTAATATCATATCACAACTGCAACTTGAGTTTTCGGAACTTATCGAAGATGTTAAAGTTAAAAATTTATTTAACGG
CCATGGTATTTTTCATCAAGATATTATGTTTGCTTTACATCAAAATGGTAGCATTTACATAAAAGCAGAAGGAGATTTAG
TATCCTATTTGGAGAAACTAGGAGCTGTAGCTTATGCAATTAACCATGATAGTATGAAGAAGCTAGCCCTATATAATTAT
TATCAATTACCAAATTCAATTCGGAGAAACAAGGAAAAATTTAAAGAAATCCTTATTCTCGCTATAAAGCAAGCAAAAGC
TAAAAAACTTTCTGATGAGCTATCTAAAAAAGAACGTATTAAAGAACTAGCTAACTTTTCTATAAAACACGAAAGACTCC
TAGCTAAGGTCAATATTTATACAGTAACTGAATATCGAAAATTAGGTGCCTATCATAGTTTTATTAGACTAAAGAAACTT
GGTATTCCTGCAAATATTGATTTATTGTGGACCTTCATTGCCGCATTAAAAAACAAACATGTAAGTTTGCTCTCTGAAGA
GGAGAAAAAGAAAAAGCTAATAAAGTTAAATGATTTATTAGAAAGTAATGGATTACGTAAAATGAAGATGTAA

Domains

Predicted by InterProScan.

TfoX C-terminal domain (TfoX_C)

(117-191)

TfoX N-terminal domain (TfoX_N)

(14-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAP7GZG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

40.306

93.333

0.376

Multiple sequence alignment