Detailed information NTG0131206

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ADJ80_RS06185
• Genome accession: NZ_CP012067
• Coordinates: 1295900..1297240 (+)
• Length: 446 a.a.
• NCBI ID: WP_050693394.1
• Uniprot ID: -
• Organism: Aggregatibacter aphrophilus strain W10433
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1290900..1302240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ADJ80_RS06170 (ADJ80_06200)	lrp	1291907..1292386 (+)	480	WP_005702602.1	leucine-responsive transcriptional regulator Lrp	-
ADJ80_RS06175 (ADJ80_06205)	-	1292404..1295159 (+)	2756	Protein_1210	DNA translocase FtsK 4TM domain-containing protein	-
ADJ80_RS06180 (ADJ80_06210)	lolA	1295270..1295887 (+)	618	WP_050693393.1	outer membrane lipoprotein chaperone LolA	-
ADJ80_RS06185 (ADJ80_06215)	rarA	1295900..1297240 (+)	1341	WP_050693394.1	replication-associated recombination protein A	Machinery gene
ADJ80_RS06190 (ADJ80_06220)	-	1297655..1299322 (-)	1668	WP_050693395.1	anaerobic C4-dicarboxylate transporter	-
ADJ80_RS06195 (ADJ80_06225)	serS	1299618..1300925 (+)	1308	WP_050693396.1	serine--tRNA ligase	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49859.85 Da
• Isoelectric Point: 6.6213

>NTDB_id=131206 ADJ80_RS06185 WP_050693394.1 1295900..1297240(+) (rarA) [Aggregatibacter aphrophilus strain W10433]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIEKAKQNKLAGSRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSTQEIERVLQQAIDDQENGLGKVRLDLQENLLSLLAEYVNGDARLALNCLEMMVDMAAESKNGKILDRTLLTEVL
GERQARFDKQGDRFYDFISALHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVAIAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLAIESADFDVPEHLRNAPTNLMKDLGFGAEYRYAHDEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLDWLKGLDQESQKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=131206 ADJ80_RS06185 WP_050693394.1 1295900..1297240(+) (rarA) [Aggregatibacter aphrophilus strain W10433]
ATGTCCAACTTCAGCTTTGATTTTAACGAAAATGATTTCCGCCCGCTCGCCGCAAGAATGCGTCCAACCACATTGGCGCA
ATATTGCGGCCAATCGCATTTATTGGGTGAAGGCAAACCGTTACGCAAAGCCATTGAGGCGGGATACGTCCATTCCATGA
TTTTCTGGGGGCCGCCAGGCACCGGAAAAACCACTTTGGCAGAGATTATCGCTCAACGCATTAACGCTGAAGTCGAGCGA
ATTTCTGCGGTCACCAGTGGCATTAAAGAAATTCGTGAAGCCATTGAAAAAGCCAAACAAAACAAATTAGCAGGTTCGCG
CACCATTTTGTTTGTGGACGAAGTTCACCGTTTCAACAAAAGCCAGCAAGATGCATTTCTGCCACATATCGAAGACGGTA
CCATTATTTTTATTGGCGCCACCACAGAAAATCCTTCTTTTGAATTAAATAACGCGCTACTTTCCCGCGCACGGGTTTAT
ATTCTCAAACCGCTTTCTACGCAGGAAATTGAACGCGTTTTGCAACAAGCGATCGACGATCAGGAAAACGGCTTGGGCAA
AGTGCGGTTAGATTTGCAGGAGAATTTGTTGTCGCTTTTGGCGGAATACGTCAACGGCGATGCACGCCTTGCGTTGAACT
GCTTGGAAATGATGGTGGACATGGCCGCCGAATCAAAAAACGGCAAAATTTTAGACCGCACTTTACTTACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGCGATCGTTTCTACGATTTCATTTCCGCGCTACATAAATCCATTCGCGG
ATCCGCACCGGATGCGGCGCTCTATTGGTATGCCCGCATTATCACTGCAGGTGGCGATCCGCTTTACGTGGCTCGTCGTT
TATTGGCCATTGCCTCGGAAGATGTGGGCAATGCCGATCCGCGTGCGATGCAGGTTGCCATTGCGGCATGGGATTGTTTT
ACCCGAGTCGGTGCCGCCGAAGGAGAACGCGCCATTGCGCAAGCCATTGTCTATTTGGCCGTTGCGCCAAAAAGCAACGC
GGTTTACCTCGCCTTCAAAGCAGCGAAAAAACTGGCTATTGAATCCGCCGATTTTGATGTGCCAGAACATCTCCGCAACG
CCCCAACCAATCTCATGAAAGATCTCGGCTTCGGTGCCGAATACCGCTACGCCCACGACGAACCCAACGCCTACGCCGCC
GGCGAAAACTACTTCCCGCCACAACTCAAAGACACTCAATTTTATTTCCCTACTACAAGAGGCATGGAGATTAAGATTAA
GGAAAAGTTGGACTGGTTAAAAGGGCTAGATCAGGAAAGTCAGAAGAAACGATATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• AAA C-terminal domain (AAA_assoc_2) (189-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.915	95.067	0.37