Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   ADJ80_RS02190 Genome accession   NZ_CP012067
Coordinates   450825..451331 (+) Length   168 a.a.
NCBI ID   WP_050692771.1    Uniprot ID   A0AAP7L3R7
Organism   Aggregatibacter aphrophilus strain W10433     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 445825..456331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ADJ80_RS02150 (ADJ80_02160) rep 445887..447902 (+) 2016 WP_050692766.1 DNA helicase Rep -
  ADJ80_RS02170 (ADJ80_02180) - 448418..448798 (-) 381 WP_050692767.1 PRD domain-containing protein -
  ADJ80_RS02175 (ADJ80_02185) - 448927..449535 (+) 609 WP_050692768.1 beta-phosphoglucomutase family hydrolase -
  ADJ80_RS02180 (ADJ80_02190) - 449529..450143 (+) 615 WP_050692769.1 sugar O-acetyltransferase -
  ADJ80_RS02185 (ADJ80_02195) - 450136..450624 (+) 489 WP_050692770.1 YqaA family protein -
  ADJ80_RS02190 (ADJ80_02200) luxS 450825..451331 (+) 507 WP_050692771.1 S-ribosylhomocysteine lyase Regulator
  ADJ80_RS02195 (ADJ80_02205) purT 451349..452530 (+) 1182 WP_050692772.1 formate-dependent phosphoribosylglycinamide formyltransferase -
  ADJ80_RS02200 (ADJ80_02210) - 452831..453148 (+) 318 WP_050692773.1 hypothetical protein -
  ADJ80_RS02205 (ADJ80_02215) - 453454..453855 (-) 402 WP_050692774.1 pyrimidine dimer DNA glycosylase/endonuclease V -
  ADJ80_RS02210 (ADJ80_02220) - 454028..454249 (-) 222 WP_050692775.1 sulfurtransferase TusA family protein -
  ADJ80_RS02215 (ADJ80_02225) - 454259..455305 (-) 1047 WP_050692776.1 YeeE/YedE family protein -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18907.56 Da        Isoelectric Point: 5.8031

>NTDB_id=131185 ADJ80_RS02190 WP_050692771.1 450825..451331(+) (luxS) [Aggregatibacter aphrophilus strain W10433]
MPLLDSFKVDHTRMKAPAVRVAKTMSTPRGDTITVFDLRFTIPNKENLPPKGIHTLEHLFAGFMRDHLNDDHVEIIDISP
MGCRTGFYMSLIGTPNEQQVAKAWLASMQDILNVKEQSQIPELNEYQCGTYTEHSLAEAHQIAQNVLARGVGINKNEELT
LDEALLNH

Nucleotide


Download         Length: 507 bp        

>NTDB_id=131185 ADJ80_RS02190 WP_050692771.1 450825..451331(+) (luxS) [Aggregatibacter aphrophilus strain W10433]
ATGCCATTACTTGATAGTTTTAAAGTGGATCATACTCGTATGAAAGCTCCAGCAGTAAGAGTTGCTAAAACTATGAGTAC
GCCAAGGGGCGACACTATAACAGTTTTCGATTTACGTTTCACTATTCCGAATAAAGAAAATTTGCCACCAAAAGGCATTC
ATACCTTAGAACATCTTTTTGCCGGTTTTATGCGCGATCATTTAAATGATGATCATGTAGAAATCATCGACATTTCCCCA
ATGGGCTGTCGTACCGGTTTTTATATGTCCTTAATCGGCACGCCAAATGAACAACAAGTGGCAAAGGCGTGGCTCGCTTC
CATGCAGGATATTTTAAATGTTAAAGAACAAAGCCAAATTCCTGAATTAAACGAGTATCAATGCGGTACTTACACCGAAC
ATTCCTTGGCTGAAGCTCATCAAATCGCCCAAAATGTGTTAGCGCGCGGCGTTGGTATCAATAAAAATGAAGAGTTGACC
TTAGATGAAGCCTTGTTAAATCACTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAP7L3R7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

74.85

99.405

0.744

Multiple sequence alignment