Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BG07_RS20305 | Genome accession | NZ_CP009651 |
| Coordinates | 3580693..3581736 (+) | Length | 347 a.a. |
| NCBI ID | WP_006096020.1 | Uniprot ID | - |
| Organism | Bacillus pseudomycoides strain BTZ | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3575693..3586736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG07_RS20275 (BG07_3587) | - | 3575859..3576683 (+) | 825 | WP_040118986.1 | DUF4037 domain-containing protein | - |
| BG07_RS20280 (BG07_3588) | - | 3576705..3577346 (+) | 642 | WP_040118985.1 | HD domain-containing protein | - |
| BG07_RS20285 (BG07_3589) | - | 3577376..3577846 (+) | 471 | WP_033796417.1 | hypothetical protein | - |
| BG07_RS20290 (BG07_3590) | - | 3577907..3579322 (-) | 1416 | WP_003200409.1 | L-cystine transporter | - |
| BG07_RS20295 (BG07_3591) | - | 3579410..3579652 (-) | 243 | WP_006096019.1 | DUF2626 domain-containing protein | - |
| BG07_RS20300 (BG07_3592) | - | 3579792..3580487 (-) | 696 | WP_003200412.1 | helix-turn-helix transcriptional regulator | - |
| BG07_RS20305 (BG07_3593) | comGA | 3580693..3581736 (+) | 1044 | WP_006096020.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BG07_RS20310 (BG07_3594) | comGB | 3581723..3582763 (+) | 1041 | WP_029427561.1 | competence type IV pilus assembly protein ComGB | - |
| BG07_RS20315 (BG07_3595) | comGC | 3582776..3583078 (+) | 303 | WP_003200417.1 | competence type IV pilus major pilin ComGC | - |
| BG07_RS20320 (BG07_3596) | comGD | 3583075..3583518 (+) | 444 | Protein_3500 | competence type IV pilus minor pilin ComGD | - |
| BG07_RS33035 | comGE | 3583499..3583816 (+) | 318 | WP_231398946.1 | competence type IV pilus minor pilin ComGE | - |
| BG07_RS20330 (BG07_3597) | comGF | 3583713..3584264 (+) | 552 | WP_080740068.1 | competence type IV pilus minor pilin ComGF | - |
| BG07_RS20335 (BG07_3598) | comGG | 3584261..3584635 (+) | 375 | WP_018765812.1 | competence type IV pilus minor pilin ComGG | - |
| BG07_RS20340 (BG07_3599) | - | 3584792..3585289 (+) | 498 | WP_003200427.1 | shikimate kinase | - |
| BG07_RS20345 (BG07_3600) | - | 3585325..3585525 (+) | 201 | WP_016116311.1 | YqzE family protein | - |
| BG07_RS20350 (BG07_3601) | - | 3585690..3586322 (-) | 633 | WP_003200259.1 | VC0807 family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38710.02 Da Isoelectric Point: 8.6412
>NTDB_id=131003 BG07_RS20305 WP_006096020.1 3580693..3581736(+) (comGA) [Bacillus pseudomycoides strain BTZ]
MNGVEHFANTIMKEACALQASDLHIVPRQADAVIQLRIGKDLVTKHCIGKEFGERLVSHFKFLASMDIGERRKPQNGSLY
LQIEGQEVHLRLSTLPTVYLESLVIRLHLQASVQPLSHLSLFPSSAKTLLSFVHHSHGLLVFTGPTGSGKTTTMYALLEV
AKKGQTRRIVTLEDPIEKRKDGLLQIQINEKAGITYTTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAVLRLMDYGITRQEIEQSLLAVAAQRLVELKCPFCKGKCSPLCKAMRQVRQASVYELLYGHELKKAICEANGER
VTYHYETLQSCIRKGYALGFLEEDVYV
MNGVEHFANTIMKEACALQASDLHIVPRQADAVIQLRIGKDLVTKHCIGKEFGERLVSHFKFLASMDIGERRKPQNGSLY
LQIEGQEVHLRLSTLPTVYLESLVIRLHLQASVQPLSHLSLFPSSAKTLLSFVHHSHGLLVFTGPTGSGKTTTMYALLEV
AKKGQTRRIVTLEDPIEKRKDGLLQIQINEKAGITYTTGLKAILRHDPDIILVGEIRDEETAKVAVRASLTGHLVMTTLH
TNDAKGAVLRLMDYGITRQEIEQSLLAVAAQRLVELKCPFCKGKCSPLCKAMRQVRQASVYELLYGHELKKAICEANGER
VTYHYETLQSCIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=131003 BG07_RS20305 WP_006096020.1 3580693..3581736(+) (comGA) [Bacillus pseudomycoides strain BTZ]
ATGAATGGTGTTGAACATTTTGCCAATACAATTATGAAGGAAGCATGTGCATTACAGGCATCCGATTTACATATCGTGCC
GCGACAAGCAGATGCAGTCATACAATTGCGCATTGGAAAAGATTTAGTAACGAAGCATTGTATTGGAAAGGAATTTGGAG
AAAGACTTGTTTCGCATTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGACGTAAGCCACAAAATGGATCATTGTAT
TTACAAATTGAGGGGCAAGAAGTGCACTTGCGTCTTTCTACACTACCAACTGTGTATTTAGAAAGCCTCGTCATTCGTTT
ACACTTGCAAGCGTCGGTTCAACCACTTTCCCATCTTTCTTTATTTCCAAGCTCGGCAAAAACACTTCTCTCTTTTGTAC
ATCATTCTCATGGATTACTCGTGTTTACTGGGCCGACAGGATCTGGGAAAACAACGACAATGTATGCTTTGTTAGAGGTA
GCCAAAAAGGGACAAACACGTCGTATTGTTACACTTGAGGATCCGATCGAAAAGAGAAAGGATGGCTTGTTACAAATTCA
GATTAATGAAAAAGCAGGTATCACGTACACAACTGGTTTAAAAGCGATTTTGCGCCATGATCCTGATATTATTTTAGTTG
GTGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTGCGTGCGAGTTTAACAGGCCATTTAGTAATGACAACATTGCAT
ACAAACGATGCAAAAGGAGCTGTGTTACGTTTGATGGACTATGGGATTACGCGGCAAGAAATTGAGCAATCATTGCTTGC
TGTGGCAGCACAGCGTCTTGTTGAATTGAAGTGTCCATTTTGCAAAGGGAAATGTTCACCGTTATGTAAAGCAATGAGGC
AAGTGCGGCAAGCAAGCGTTTATGAGTTGTTATATGGCCATGAATTGAAAAAAGCTATTTGTGAAGCGAATGGAGAGCGT
GTAACCTATCATTATGAAACGTTGCAATCATGTATAAGAAAAGGATATGCCTTAGGCTTTTTAGAAGAGGATGTTTATGT
TTGA
ATGAATGGTGTTGAACATTTTGCCAATACAATTATGAAGGAAGCATGTGCATTACAGGCATCCGATTTACATATCGTGCC
GCGACAAGCAGATGCAGTCATACAATTGCGCATTGGAAAAGATTTAGTAACGAAGCATTGTATTGGAAAGGAATTTGGAG
AAAGACTTGTTTCGCATTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGACGTAAGCCACAAAATGGATCATTGTAT
TTACAAATTGAGGGGCAAGAAGTGCACTTGCGTCTTTCTACACTACCAACTGTGTATTTAGAAAGCCTCGTCATTCGTTT
ACACTTGCAAGCGTCGGTTCAACCACTTTCCCATCTTTCTTTATTTCCAAGCTCGGCAAAAACACTTCTCTCTTTTGTAC
ATCATTCTCATGGATTACTCGTGTTTACTGGGCCGACAGGATCTGGGAAAACAACGACAATGTATGCTTTGTTAGAGGTA
GCCAAAAAGGGACAAACACGTCGTATTGTTACACTTGAGGATCCGATCGAAAAGAGAAAGGATGGCTTGTTACAAATTCA
GATTAATGAAAAAGCAGGTATCACGTACACAACTGGTTTAAAAGCGATTTTGCGCCATGATCCTGATATTATTTTAGTTG
GTGAAATTCGTGATGAAGAAACAGCAAAAGTAGCTGTGCGTGCGAGTTTAACAGGCCATTTAGTAATGACAACATTGCAT
ACAAACGATGCAAAAGGAGCTGTGTTACGTTTGATGGACTATGGGATTACGCGGCAAGAAATTGAGCAATCATTGCTTGC
TGTGGCAGCACAGCGTCTTGTTGAATTGAAGTGTCCATTTTGCAAAGGGAAATGTTCACCGTTATGTAAAGCAATGAGGC
AAGTGCGGCAAGCAAGCGTTTATGAGTTGTTATATGGCCATGAATTGAAAAAAGCTATTTGTGAAGCGAATGGAGAGCGT
GTAACCTATCATTATGAAACGTTGCAATCATGTATAAGAAAAGGATATGCCTTAGGCTTTTTAGAAGAGGATGTTTATGT
TTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |