Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HKU488_RS00665 | Genome accession | NZ_CP012045 |
| Coordinates | 104644..104928 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes strain HKU488 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 99644..109928
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKU488_RS00640 (HKU488_00008) | - | 101590..101955 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| HKU488_RS00645 (HKU488_00009) | comGA | 102048..102986 (+) | 939 | WP_010921798.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HKU488_RS00650 (HKU488_00010) | comGB | 102922..103956 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HKU488_RS00655 (HKU488_00011) | comGC | 103958..104284 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HKU488_RS00660 (HKU488_00012) | comGD | 104259..104687 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HKU488_RS00665 (HKU488_00013) | comGE | 104644..104928 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| HKU488_RS00670 (HKU488_00014) | comGF | 104921..105355 (+) | 435 | WP_010921800.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HKU488_RS00675 (HKU488_00015) | comGG | 105339..105665 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| HKU488_RS00680 (HKU488_00016) | comGH | 105763..106716 (+) | 954 | WP_010921802.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HKU488_RS00685 (HKU488_00017) | - | 106775..107971 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| HKU488_RS00690 | - | 108158..108466 (+) | 309 | WP_010921804.1 | hypothetical protein | - |
| HKU488_RS00695 (HKU488_00018) | proC | 108549..109319 (-) | 771 | WP_010921805.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=130983 HKU488_RS00665 WP_002987779.1 104644..104928(+) (comGE) [Streptococcus pyogenes strain HKU488]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=130983 HKU488_RS00665 WP_002987779.1 104644..104928(+) (comGE) [Streptococcus pyogenes strain HKU488]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTAAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |