Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AK40_RS30700 Genome accession   NZ_CP009641
Coordinates   5219225..5219908 (+) Length   227 a.a.
NCBI ID   WP_000350710.1    Uniprot ID   Q81TR3
Organism   Bacillus cereus 03BB108     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 5214225..5224908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AK40_RS30675 (AK40_5356) - 5215307..5216953 (+) 1647 WP_001994624.1 peptide ABC transporter substrate-binding protein -
  AK40_RS30680 (AK40_5357) - 5216982..5217185 (-) 204 WP_000559980.1 hypothetical protein -
  AK40_RS30690 (AK40_5358) spx 5217779..5218174 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AK40_RS30695 (AK40_5359) - 5218224..5218898 (-) 675 WP_001994610.1 TerC family protein -
  AK40_RS30700 (AK40_5360) mecA 5219225..5219908 (+) 684 WP_000350710.1 adaptor protein MecA Regulator
  AK40_RS30705 (AK40_5361) - 5219981..5221525 (+) 1545 WP_000799204.1 cardiolipin synthase -
  AK40_RS30710 (AK40_5362) - 5221607..5222851 (+) 1245 WP_000612274.1 competence protein CoiA -
  AK40_RS30715 (AK40_5363) pepF 5222902..5224728 (+) 1827 WP_000003393.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26966.00 Da        Isoelectric Point: 3.9822

>NTDB_id=130925 AK40_RS30700 WP_000350710.1 5219225..5219908(+) (mecA) [Bacillus cereus 03BB108]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=130925 AK40_RS30700 WP_000350710.1 5219225..5219908(+) (mecA) [Bacillus cereus 03BB108]
TTGGATATTGAAAGAATTAATGATCATACGATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q81TR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment