Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AK40_RS17690 Genome accession   NZ_CP009641
Coordinates   2691543..2692337 (-) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus 03BB108     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2686543..2697337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AK40_RS17665 (AK40_2755) - 2686626..2688698 (-) 2073 WP_000810995.1 sigma-54 interaction domain-containing protein -
  AK40_RS17670 (AK40_2756) - 2688835..2689068 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  AK40_RS17675 (AK40_2757) - 2689117..2689845 (-) 729 WP_000172561.1 glycerophosphodiester phosphodiesterase -
  AK40_RS17680 (AK40_2758) - 2689896..2690042 (+) 147 WP_001247671.1 YycC family protein -
  AK40_RS17685 (AK40_2759) - 2690210..2691358 (-) 1149 Protein_2784 hypothetical protein -
  AK40_RS17690 (AK40_2760) spo0A 2691543..2692337 (-) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  AK40_RS17695 (AK40_2761) spoIVB 2692625..2693923 (-) 1299 WP_002003478.1 SpoIVB peptidase -
  AK40_RS17700 (AK40_2762) recN 2694042..2695781 (-) 1740 WP_000947754.1 DNA repair protein RecN Machinery gene
  AK40_RS17705 (AK40_2763) argR 2696049..2696498 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=130890 AK40_RS17690 WP_003161566.1 2691543..2692337(-) (spo0A) [Bacillus cereus 03BB108]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=130890 AK40_RS17690 WP_003161566.1 2691543..2692337(-) (spo0A) [Bacillus cereus 03BB108]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGACATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATTGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment