Detailed information NTG0130820

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: VT05_RS10940
• Genome accession: NZ_CP012026
• Coordinates: 2023063..2026191 (-)
• Length: 1042 a.a.
• NCBI ID: WP_020996762.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FA19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2018063..2031191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VT05_RS10915 (VT05_02075)	-	2019317..2019706 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
VT05_RS10925 (VT05_02076)	-	2019869..2020248 (-)	380	Protein_2055	VOC family protein	-
VT05_RS10930 (VT05_02077)	carA	2020302..2021435 (-)	1134	WP_003692502.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
VT05_RS10940 (VT05_02078)	pilC	2023063..2026191 (-)	3129	WP_020996762.1	PilC family type IV pilus tip adhesin	Machinery gene
VT05_RS10955 (VT05_02080)	apbC	2028241..2029320 (-)	1080	WP_017146699.1	iron-sulfur cluster carrier protein ApbC	-
VT05_RS10965 (VT05_02082)	-	2029693..2030202 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
VT05_RS10975 (VT05_02083)	nadR	2030543..2030983 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1042 a.a.
• Molecular weight: 114338.99 Da
• Isoelectric Point: 9.7927

>NTDB_id=130820 VT05_RS10940 WP_020996762.1 2023063..2026191(-) (pilC) [Neisseria gonorrhoeae strain FA19]
MNKTLKRRVFRHTALYAAILMFSHTGGGGAMAQTRNYAIVMNERNQPEVKWEGQYNQSALKDKSRERTFSHTSQKNDLGI
TSNFISFNNNDELVSQQSGTAVFGTATYLPPYGKVSGFDTDRLKERANAAGWIRTTRPGLAGYAYTGVTCRSSNQCPQLV
YKTRFSFDNTGLAKNAGRLDRHPDPSRENSPIYKLKDHPWLGVSFNLGSEGTDKDGRSSNKLVSSFDENNSNSNQNLVYT
TEGHRISLGDWQREHTAMAYYLNAKLHLLNKKEIKDIAQNKTVDLGTLRPRVETTGRGWLSFWATWKIEDKGNITVRLGL
PEVKAGRCTNTAHPNSKAKPLSPALTAPALWFGPGQNGKVQMYSASVSTYPGSSSSRIFLQELKTRTDSARPGRHSLAAL
DTQNIKSREPGFNGRQTVIRLPGGVYKINPGKNGGRVAGINGNDGKNDTFGIFKDRYVTPETDEWSEMLLPWTARYYGND
TPFQTSNKPNNQKKYSQKYRIRTKEDDNDKPRDLGDIVNSPIVAVDGYLATSANDGMVHLFKRNGTDQRGYELKLSYIPG
TMERKDIENQDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGFGGRGAYALDLSKIDSSNLTG
VSMFDVQNDKNNNKNDSNRVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDIGSGDNTTALYVYDLENGSGSLIKKIEAP
GGKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSNSDLNKWSAKAIFEGTKPITSAPAVSRLADKRVVIFGTGSDL
SEEDVVGTNQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQTLTKENNTLFLSNNKASGGSNGEGWVVKLGEGERVTVKPTV
VLRTAFVTIRKYTGMDKCGAQTAILGINTADGGALTPRSARPIVPSDQVAQYSGHKTTSKGKSVPIGCMEKDSKTVCPNG
YIYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREV
FF

Nucleotide

• Length: 3129 bp

>NTDB_id=130820 VT05_RS10940 WP_020996762.1 2023063..2026191(-) (pilC) [Neisseria gonorrhoeae strain FA19]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACCCGTAACTACGCTATTGTCATGAACGAACGAAATCAGCCGGAGGTAAAGTGGGAGGGTC
AATATAATCAATCAGCATTAAAGGACAAAAGCAGGGAGCGGACATTTAGCCATACGAGCCAGAAAAACGACCTCGGCATC
ACAAGCAATTTTATCTCATTCAACAATAACGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAGAGCGCGCCAATGCCGCCGGTTGGATTC
GTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGGCGTCACATGCAGAAGCAGCAACCAATGCCCCCAACTTGTC
TATAAAACCCGATTTTCCTTCGACAACACCGGTTTGGCAAAAAATGCGGGCAGGCTGGATAGGCACCCGGACCCAAGCCG
CGAAAATTCGCCCATTTACAAATTGAAAGATCATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGGGTACCGACA
AAGATGGCAGATCATCCAACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTCTATACG
ACAGAAGGCCACCGTATTTCCCTTGGCGACTGGCAGCGCGAACATACCGCCATGGCCTATTATCTGAACGCCAAACTGCA
CCTGCTGAACAAAAAAGAGATTAAAGATATCGCCCAAAACAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGA
CGACAGGACGAGGCTGGCTAAGTTTTTGGGCTACGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGGTCTG
CCGGAAGTCAAAGCAGGCCGCTGCACCAACACCGCCCACCCCAATTCCAAAGCCAAACCCCTTTCGCCGGCCCTGACCGC
CCCCGCGCTGTGGTTCGGCCCTGGGCAAAATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGGCAGCT
CGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCGAACCGACTCCGCCCGGCCCGGCCGGCATTCCCTCGCCGCTTTG
GATACGCAGAACATCAAAAGCCGCGAGCCGGGTTTCAACGGAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACAA
GATCAACCCGGGCAAGAACGGCGGCCGGGTCGCGGGTATTAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTTCA
AGGACAGGTATGTCACACCTGAGACCGACGAGTGGAGCGAAATGCTGCTGCCTTGGACGGCTCGGTATTACGGTAATGAC
ACTCCATTTCAAACATCCAACAAACCAAACAACCAAAAAAAATACAGCCAAAAATACCGCATCCGCACAAAAGAAGATGA
CAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGACGGGTATTTGGCAACTTCTGCCA
ACGACGGGATGGTGCACCTGTTTAAAAGAAACGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCGGGT
ACGATGGAGCGTAAGGATATTGAAAACCAAGACTCCACCCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGT
GGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAAGACAGGCAAAAACATTTCTTTA
TGTTTGGTGCGATGGGTTTTGGCGGCAGAGGCGCGTATGCCTTGGATTTAAGCAAAATCGACAGCAGCAACCTGACCGGC
GTTTCCATGTTTGATGTCCAAAACGACAAAAATAACAATAAGAATGACAGTAATCGCGTGAAATTAGGCTACACCGTCGG
TACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAAGATATTGGCA
GCGGCGATAATACAACCGCGCTGTATGTGTATGATTTGGAAAACGGCAGTGGTAGTCTGATTAAAAAAATCGAAGCACCC
GGCGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGA
CCGGGGCGGCAATATGTACCGCTTTGATTTGAGCAATTCCGATCTTAATAAATGGTCTGCAAAGGCTATTTTCGAAGGCA
CAAAACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTTATCTTCGGTACGGGCAGCGATTTG
AGTGAAGAGGATGTAGTCGGTACGAATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAAC
GGTACAAAACGGCACGGGAGGCGGGTTGCTCGAGCAAACGCTTACGAAGGAAAATAACACCTTGTTCCTGAGCAATAATA
AGGCATCCGGCGGATCGAACGGCGAAGGGTGGGTAGTGAAATTGGGGGAAGGAGAACGCGTTACCGTCAAACCGACCGTG
GTATTGCGTACCGCCTTCGTGACCATCCGGAAATATACGGGCATGGACAAATGTGGCGCGCAAACCGCCATTTTGGGCAT
CAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGAGTGACCAGGTTGCGCAATATTCCG
GCCATAAGACAACCTCCAAAGGCAAGTCCGTCCCTATAGGTTGTATGGAAAAAGACAGCAAAACCGTCTGCCCGAACGGA
TATATTTACGACAAACCGGTTAATGTGCGCTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGA
TGCAGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCA
CCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTC
TTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (528-854)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.175	100	0.729